| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345579
Identifier: 29345579
GI number: 29345579
Start: 177407
End: 178462
Strand: Reverse
Name: 29345579
Synonym: BT_0169
Alternate gene names: NA
Gene position: 178462-177407 (Counterclockwise)
Preceding gene: 29345580
Following gene: 29345578
Centisome position: 2.85
GC content: 42.52
Gene sequence:
>1056_bases ATGAAAAAGAACTTACTATTATTACTTTGCTTGTTTTGTCTGGTCAATGTTTGCCATGCAAAAGCGAAAGACACTTTTAC CGTTTTCCAATTAAACCTGTGGCATGGATGTACTAAAGTACCCAACGGAGATCAAGGCATTATTGATGTACTGGATCAGA TGGATGCGGATGTCGTTTTTCTGTGCGAAATCAGAGACGGAAAACAGTTTATCCCTCATGTGATCGAAGAGCTGGAGAAG AGAGGAAAACATTACTATGGTGAAACGTTTGATCTTGCAATCGGTGTTTTGAGTAAATTCAAGCCGGACAGTTGGACCAA ATGCTGCATCGTACCTGGTGACGAAGGTCGTGCTATGGTGAAAATGGTTGCAACAATCGAAGGCCAACCCGTATCTTTCT ATTCTTGTCATTTGGACTACCGGCATTATCAATGCTATATGCCACGTGGATATAATGGTACTACCTGGAAGAAAATGGAT AAGCCGATAACGGATGAAGAAGAAGTCTTGAAAGCAAACAGACAGTCTTTCCGGGATGAAACCATCCGTGCTTTTATTCA GGAAGTACAATCTGACATTCAACAAGGCCGCCCGATAATCATGGGAGGAGATTTTAATGAGCCCTCTCATTTAGACTGGC AGGCAGATACAAAGGATTTGTGGGATCATAATGGGGCTATCATTCATTGGGACTGCTCAATGATGCTGAGCAAAGCAGGA TTCAAAGATGCTTATCGTGAAAAATTTCCCAATACAGTTCGATATCCCGGTTTTACATTCCCTGCCGGAAACAAACTCGC AGAAGAGGCTAAACTGGAAAAGTTAGCTTGGGCGCCTGAGGCAGACGAACGTGACCGGATTGATTTCATTTATTATTATC CATTGGAGTCGATGCTTTCCATGAAGGATAGCAAGTTGGTAGGTCCCTCCGAAACAGTTGTCCGGGGAAAAATAACAGAA AACGATTCTAAGGATAAGATTCTGACGCCTTCTTGTATTTGGCCCAGCGACCATAAAGGGAATCTTGCTACATTTAAGAT TCGGAAGAAACGGTAA
Upstream 100 bases:
>100_bases AAATGTATTACTTTTGCATGAATTCTTAATGACCTATGGTATGGAATATATCAATGAATTTCACAATGACTGAAATTCCA AAGAATATAAAGGACACGAT
Downstream 100 bases:
>100_bases TAGTATATTGAATAGGGTGACATCTACAGGATGATATACATACTCTGTTACTACAGTCTCCTTTATCTCATCCGCCAAAT AGCCTACTGGTCCATGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Exported Phosphatase; Endonuclease/Exonuclease/Phosphatase Family; Hydrolase
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKKNLLLLLCLFCLVNVCHAKAKDTFTVFQLNLWHGCTKVPNGDQGIIDVLDQMDADVVFLCEIRDGKQFIPHVIEELEK RGKHYYGETFDLAIGVLSKFKPDSWTKCCIVPGDEGRAMVKMVATIEGQPVSFYSCHLDYRHYQCYMPRGYNGTTWKKMD KPITDEEEVLKANRQSFRDETIRAFIQEVQSDIQQGRPIIMGGDFNEPSHLDWQADTKDLWDHNGAIIHWDCSMMLSKAG FKDAYREKFPNTVRYPGFTFPAGNKLAEEAKLEKLAWAPEADERDRIDFIYYYPLESMLSMKDSKLVGPSETVVRGKITE NDSKDKILTPSCIWPSDHKGNLATFKIRKKR
Sequences:
>Translated_351_residues MKKNLLLLLCLFCLVNVCHAKAKDTFTVFQLNLWHGCTKVPNGDQGIIDVLDQMDADVVFLCEIRDGKQFIPHVIEELEK RGKHYYGETFDLAIGVLSKFKPDSWTKCCIVPGDEGRAMVKMVATIEGQPVSFYSCHLDYRHYQCYMPRGYNGTTWKKMD KPITDEEEVLKANRQSFRDETIRAFIQEVQSDIQQGRPIIMGGDFNEPSHLDWQADTKDLWDHNGAIIHWDCSMMLSKAG FKDAYREKFPNTVRYPGFTFPAGNKLAEEAKLEKLAWAPEADERDRIDFIYYYPLESMLSMKDSKLVGPSETVVRGKITE NDSKDKILTPSCIWPSDHKGNLATFKIRKKR >Mature_351_residues MKKNLLLLLCLFCLVNVCHAKAKDTFTVFQLNLWHGCTKVPNGDQGIIDVLDQMDADVVFLCEIRDGKQFIPHVIEELEK RGKHYYGETFDLAIGVLSKFKPDSWTKCCIVPGDEGRAMVKMVATIEGQPVSFYSCHLDYRHYQCYMPRGYNGTTWKKMD KPITDEEEVLKANRQSFRDETIRAFIQEVQSDIQQGRPIIMGGDFNEPSHLDWQADTKDLWDHNGAIIHWDCSMMLSKAG FKDAYREKFPNTVRYPGFTFPAGNKLAEEAKLEKLAWAPEADERDRIDFIYYYPLESMLSMKDSKLVGPSETVVRGKITE NDSKDKILTPSCIWPSDHKGNLATFKIRKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI71989663, Length=274, Percent_Identity=28.4671532846715, Blast_Score=90, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40400; Mature: 40400
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNLLLLLCLFCLVNVCHAKAKDTFTVFQLNLWHGCTKVPNGDQGIIDVLDQMDADVVF CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEE LCEIRDGKQFIPHVIEELEKRGKHYYGETFDLAIGVLSKFKPDSWTKCCIVPGDEGRAMV EEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE KMVATIEGQPVSFYSCHLDYRHYQCYMPRGYNGTTWKKMDKPITDEEEVLKANRQSFRDE EEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHH TIRAFIQEVQSDIQQGRPIIMGGDFNEPSHLDWQADTKDLWDHNGAIIHWDCSMMLSKAG HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCEEEEEHHHHHHHCC FKDAYREKFPNTVRYPGFTFPAGNKLAEEAKLEKLAWAPEADERDRIDFIYYYPLESMLS CHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHC MKDSKLVGPSETVVRGKITENDSKDKILTPSCIWPSDHKGNLATFKIRKKR CCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure MKKNLLLLLCLFCLVNVCHAKAKDTFTVFQLNLWHGCTKVPNGDQGIIDVLDQMDADVVF CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEE LCEIRDGKQFIPHVIEELEKRGKHYYGETFDLAIGVLSKFKPDSWTKCCIVPGDEGRAMV EEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEE KMVATIEGQPVSFYSCHLDYRHYQCYMPRGYNGTTWKKMDKPITDEEEVLKANRQSFRDE EEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHH TIRAFIQEVQSDIQQGRPIIMGGDFNEPSHLDWQADTKDLWDHNGAIIHWDCSMMLSKAG HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCHHHHCCCCCEEEEEHHHHHHHCC FKDAYREKFPNTVRYPGFTFPAGNKLAEEAKLEKLAWAPEADERDRIDFIYYYPLESMLS CHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHC MKDSKLVGPSETVVRGKITENDSKDKILTPSCIWPSDHKGNLATFKIRKKR CCCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA