Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29345581

Identifier: 29345581

GI number: 29345581

Start: 179107

End: 180390

Strand: Reverse

Name: 29345581

Synonym: BT_0171

Alternate gene names: NA

Gene position: 180390-179107 (Counterclockwise)

Preceding gene: 29345582

Following gene: 29345580

Centisome position: 2.88

GC content: 32.79

Gene sequence:

>1284_bases
ATGAAAATTGTATATAACACTATTCTCTTTACATTACTATTTCTAGCCACAAGCTGTGATCATTCGGAGAAAATCGATGA
TATAAAACTTGAAATTTCACAAAACATCTTCCGCAACATCGACAATAACGGAGGGAAAATAACTGTTGCTATCACATCTA
ATTCTGAATGGATCATCGCAAATTCAGCTGATTGGTGCATACCAGACAAATATCAAGGAGAAGGAAACGATATACTTACT
ATAAAAATTCTAGCTAACACCAAACATGCAAACAGACAAACTAATCTAATCATATCCGCCCAAGGGATAAACCAAACAAT
CAAGATTTCACAACAAAAAGGAGAAGTTAATCCAGATTTAGATAAAATACACTATCAATTACCCGTTATTTTCCATGTTC
TTTATCAAAACGAAAATGACATAAATCAATATATAAAAGAAGACCATTTAAAAGATGTATTAGTGCGAACTAACCATTTC
TATCAATCTGAAAAGTGTGGAATTGATATAAATCTCGAATTTGTATTAGCAACCAAAGATAAGAATGGAACCACACTACC
AGAACCTGGAGTAGAAAGAGTGCCATTTAATGAGCTTCCTATTGATTGCGAAAAGTTTATGAGAGATAATACAGGAAAAT
ATACATCTTTACTATGGGAACCCAATGAATACATTAACATAATGGTATATCCTTTTACGGATTCGCAGATTTTAGGCATA
TCTACATTTCCATATAGTTTAAAGGACTTTTTTTTAGAAGGGACTCAACAAGTATCAGCTTCGTGGATCACTTTAGAGAA
TTTGAGTTTCCCATATTGTATATCGATCAATAGTTCATATATTTATGAGCAAAGTACAGATGAAAGAATTAATCAAAACG
ATGCTGCAATAACATTAGCACACGAACTCGGACACTATTTAGGATTACGTCATGTATTCTCAGAAGGAGGGACCACTTCA
ATGTGTACCGATACTGATTATTGCAAAGATACTCCCAGTTATAACCGTAGTGAGTATGAACAATGGCTTAACAATTTGGA
TAAACAGAATAAATATCAATTAAAAGATTTAGCTAAACGATATAGCTGTGAAAAAGGAGAATATGAAGCACACAACATTA
TGGACTATGCATATTGCTTTTATAATGAAATAACTTTAGAACAACGAAAAAGAATACGCCATATCTTAAACTATAGCCCA
CTGATTCCAGGTCCCAAAGAAAGCAGAATAGATACCAGAGGCGTACAAGACAGATTGAATTTGCCAATATGTATAATGAA
ATAA

Upstream 100 bases:

>100_bases
TACAGTAAAAGTAGAAATTCAGTAAAGGTTACAAATATCCCAAAGCCGTAATTTCCCTTTTCTTGAAAATGAGAAATTAC
GGCTTTTATAAATAAAAGCT

Downstream 100 bases:

>100_bases
CATAATCAGGTAAAACGGGGCAGCAAGTATTTCATCGACTGTTCCTCCATAGTAGTCAAATGTCAGAACAAGTCTTGACT
ATTACAACTAATTATCCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MKIVYNTILFTLLFLATSCDHSEKIDDIKLEISQNIFRNIDNNGGKITVAITSNSEWIIANSADWCIPDKYQGEGNDILT
IKILANTKHANRQTNLIISAQGINQTIKISQQKGEVNPDLDKIHYQLPVIFHVLYQNENDINQYIKEDHLKDVLVRTNHF
YQSEKCGIDINLEFVLATKDKNGTTLPEPGVERVPFNELPIDCEKFMRDNTGKYTSLLWEPNEYINIMVYPFTDSQILGI
STFPYSLKDFFLEGTQQVSASWITLENLSFPYCISINSSYIYEQSTDERINQNDAAITLAHELGHYLGLRHVFSEGGTTS
MCTDTDYCKDTPSYNRSEYEQWLNNLDKQNKYQLKDLAKRYSCEKGEYEAHNIMDYAYCFYNEITLEQRKRIRHILNYSP
LIPGPKESRIDTRGVQDRLNLPICIMK

Sequences:

>Translated_427_residues
MKIVYNTILFTLLFLATSCDHSEKIDDIKLEISQNIFRNIDNNGGKITVAITSNSEWIIANSADWCIPDKYQGEGNDILT
IKILANTKHANRQTNLIISAQGINQTIKISQQKGEVNPDLDKIHYQLPVIFHVLYQNENDINQYIKEDHLKDVLVRTNHF
YQSEKCGIDINLEFVLATKDKNGTTLPEPGVERVPFNELPIDCEKFMRDNTGKYTSLLWEPNEYINIMVYPFTDSQILGI
STFPYSLKDFFLEGTQQVSASWITLENLSFPYCISINSSYIYEQSTDERINQNDAAITLAHELGHYLGLRHVFSEGGTTS
MCTDTDYCKDTPSYNRSEYEQWLNNLDKQNKYQLKDLAKRYSCEKGEYEAHNIMDYAYCFYNEITLEQRKRIRHILNYSP
LIPGPKESRIDTRGVQDRLNLPICIMK
>Mature_427_residues
MKIVYNTILFTLLFLATSCDHSEKIDDIKLEISQNIFRNIDNNGGKITVAITSNSEWIIANSADWCIPDKYQGEGNDILT
IKILANTKHANRQTNLIISAQGINQTIKISQQKGEVNPDLDKIHYQLPVIFHVLYQNENDINQYIKEDHLKDVLVRTNHF
YQSEKCGIDINLEFVLATKDKNGTTLPEPGVERVPFNELPIDCEKFMRDNTGKYTSLLWEPNEYINIMVYPFTDSQILGI
STFPYSLKDFFLEGTQQVSASWITLENLSFPYCISINSSYIYEQSTDERINQNDAAITLAHELGHYLGLRHVFSEGGTTS
MCTDTDYCKDTPSYNRSEYEQWLNNLDKQNKYQLKDLAKRYSCEKGEYEAHNIMDYAYCFYNEITLEQRKRIRHILNYSP
LIPGPKESRIDTRGVQDRLNLPICIMK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49408; Mature: 49408

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVYNTILFTLLFLATSCDHSEKIDDIKLEISQNIFRNIDNNGGKITVAITSNSEWIIA
CEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHCCCCCCEEEEEEECCCCEEEE
NSADWCIPDKYQGEGNDILTIKILANTKHANRQTNLIISAQGINQTIKISQQKGEVNPDL
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCH
DKIHYQLPVIFHVLYQNENDINQYIKEDHLKDVLVRTNHFYQSEKCGIDINLEFVLATKD
HHHEEHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEC
KNGTTLPEPGVERVPFNELPIDCEKFMRDNTGKYTSLLWEPNEYINIMVYPFTDSQILGI
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEE
STFPYSLKDFFLEGTQQVSASWITLENLSFPYCISINSSYIYEQSTDERINQNDAAITLA
EECCHHHHHHHHCCCHHHCEEEEEEECCCCCEEEEECCCEEEECCCHHHCCCCCCEEEEH
HELGHYLGLRHVFSEGGTTSMCTDTDYCKDTPSYNRSEYEQWLNNLDKQNKYQLKDLAKR
HHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
YSCEKGEYEAHNIMDYAYCFYNEITLEQRKRIRHILNYSPLIPGPKESRIDTRGVQDRLN
HCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCC
LPICIMK
CCEEEEC
>Mature Secondary Structure
MKIVYNTILFTLLFLATSCDHSEKIDDIKLEISQNIFRNIDNNGGKITVAITSNSEWIIA
CEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHCCCCCCEEEEEEECCCCEEEE
NSADWCIPDKYQGEGNDILTIKILANTKHANRQTNLIISAQGINQTIKISQQKGEVNPDL
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCH
DKIHYQLPVIFHVLYQNENDINQYIKEDHLKDVLVRTNHFYQSEKCGIDINLEFVLATKD
HHHEEHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEC
KNGTTLPEPGVERVPFNELPIDCEKFMRDNTGKYTSLLWEPNEYINIMVYPFTDSQILGI
CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCEEEEEEEECCCCEEEEE
STFPYSLKDFFLEGTQQVSASWITLENLSFPYCISINSSYIYEQSTDERINQNDAAITLA
EECCHHHHHHHHCCCHHHCEEEEEEECCCCCEEEEECCCEEEECCCHHHCCCCCCEEEEH
HELGHYLGLRHVFSEGGTTSMCTDTDYCKDTPSYNRSEYEQWLNNLDKQNKYQLKDLAKR
HHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHH
YSCEKGEYEAHNIMDYAYCFYNEITLEQRKRIRHILNYSPLIPGPKESRIDTRGVQDRLN
HCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCC
LPICIMK
CCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA