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The map label for this gene is yggG [H]

Identifier: 29345559

GI number: 29345559

Start: 153042

End: 153824

Strand: Reverse

Name: yggG [H]

Synonym: BT_0149

Alternate gene names: 29345559

Gene position: 153824-153042 (Counterclockwise)

Preceding gene: 29345560

Following gene: 29345558

Centisome position: 2.46

GC content: 45.98

Gene sequence:

>783_bases
ATGAAAAAACAAATTGCATTAGTAGCCCTGTTATTTTTGGGCATGAGTTGTTTTAACGCTTCAGCACAATTCAAGAAATT
CAATTTAGGCAAAGCTATTCAAGCAGGAAAAGATGCCGCACAAGCAATCTCTCTATCTGACGCCGACATTGCTGCTATGA
GCAAGGAGTATATGGAATGGATGGACAAGCATAACCCACTGACCAAACCGGACAGCGAATACGGAAAACGCCTGGAAAGA
CTGACCGGAAACATCAAAGAAGTAGATGGTATGAAAGTTAACTTTGGCGTATATGAAGTAGTGGACGTTAACGCTTTCGC
CTGTGGTGACGGCAGCGTGCGTATCTGTGCCGGACTGATGGACGTCATGACTGACGAAGAAGTAATGGCAGTAATCGGTC
ATGAGATCGGTCATGTCATCCATACCGACTCTAAAGACGCAATGAAGAATGCATATTTCCGTTCGGCTGTAAAGAATGCG
GCAGGAGCAGCCAGCAGCCAGGTCGCCAAACTGACTGACTCTGAACTGGGAGCAATGGCAGAAGCACTTGCCGGCGCACA
ATACTCACAGAAACAAGAGTACGAAGCAGATGCCTACGGCGTAGAGTTCTGCGTAAAAAACAACATCGACCCTTATGGTA
TGTACAAATCACTGAATAAGCTTCTCGAATTGTCCAATGGGGCTCCCGCATCTTCCTACATGCAGAGAATGTTTTCTTCA
CACCCCGACACTGCCAAACGTGTAGCCCGTGCTAAAGAACTGGCTGATAAATACAAACAATAA

Upstream 100 bases:

>100_bases
AGTCGCTCAAGCAAGAAAGCGGTACACTGCTGCCGACTTTGGGAATCACGTTTGAATACTAACACTATATTATATAATAA
CAAACTAAAAATTCACTATG

Downstream 100 bases:

>100_bases
AAAAGACTCAAGATCAGAAATTACAAAAGAACATATTCCGAGAGCATTTACTTTGCAACCTCGGAATATGTTCTTTTGTT
CTTAAGCCCCCTCATTTCAA

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKKQIALVALLFLGMSCFNASAQFKKFNLGKAIQAGKDAAQAISLSDADIAAMSKEYMEWMDKHNPLTKPDSEYGKRLER
LTGNIKEVDGMKVNFGVYEVVDVNAFACGDGSVRICAGLMDVMTDEEVMAVIGHEIGHVIHTDSKDAMKNAYFRSAVKNA
AGAASSQVAKLTDSELGAMAEALAGAQYSQKQEYEADAYGVEFCVKNNIDPYGMYKSLNKLLELSNGAPASSYMQRMFSS
HPDTAKRVARAKELADKYKQ

Sequences:

>Translated_260_residues
MKKQIALVALLFLGMSCFNASAQFKKFNLGKAIQAGKDAAQAISLSDADIAAMSKEYMEWMDKHNPLTKPDSEYGKRLER
LTGNIKEVDGMKVNFGVYEVVDVNAFACGDGSVRICAGLMDVMTDEEVMAVIGHEIGHVIHTDSKDAMKNAYFRSAVKNA
AGAASSQVAKLTDSELGAMAEALAGAQYSQKQEYEADAYGVEFCVKNNIDPYGMYKSLNKLLELSNGAPASSYMQRMFSS
HPDTAKRVARAKELADKYKQ
>Mature_260_residues
MKKQIALVALLFLGMSCFNASAQFKKFNLGKAIQAGKDAAQAISLSDADIAAMSKEYMEWMDKHNPLTKPDSEYGKRLER
LTGNIKEVDGMKVNFGVYEVVDVNAFACGDGSVRICAGLMDVMTDEEVMAVIGHEIGHVIHTDSKDAMKNAYFRSAVKNA
AGAASSQVAKLTDSELGAMAEALAGAQYSQKQEYEADAYGVEFCVKNNIDPYGMYKSLNKLLELSNGAPASSYMQRMFSS
HPDTAKRVARAKELADKYKQ

Specific function: Seems to regulate the expression of speB [H]

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Escherichia coli, GI87082185, Length=244, Percent_Identity=37.2950819672131, Blast_Score=157, Evalue=5e-40,
Organism=Escherichia coli, GI87081800, Length=252, Percent_Identity=36.1111111111111, Blast_Score=141, Evalue=4e-35,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 28359; Mature: 28359

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQIALVALLFLGMSCFNASAQFKKFNLGKAIQAGKDAAQAISLSDADIAAMSKEYMEW
CCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHH
MDKHNPLTKPDSEYGKRLERLTGNIKEVDGMKVNFGVYEVVDVNAFACGDGSVRICAGLM
HHHCCCCCCCCHHHHHHHHHHHCCHHHCCCCEEECCEEEEEECCEEEECCCCHHHHHHHH
DVMTDEEVMAVIGHEIGHVIHTDSKDAMKNAYFRSAVKNAAGAASSQVAKLTDSELGAMA
HHHCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
EALAGAQYSQKQEYEADAYGVEFCVKNNIDPYGMYKSLNKLLELSNGAPASSYMQRMFSS
HHHHCCHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
HPDTAKRVARAKELADKYKQ
CCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKQIALVALLFLGMSCFNASAQFKKFNLGKAIQAGKDAAQAISLSDADIAAMSKEYMEW
CCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHH
MDKHNPLTKPDSEYGKRLERLTGNIKEVDGMKVNFGVYEVVDVNAFACGDGSVRICAGLM
HHHCCCCCCCCHHHHHHHHHHHCCHHHCCCCEEECCEEEEEECCEEEECCCCHHHHHHHH
DVMTDEEVMAVIGHEIGHVIHTDSKDAMKNAYFRSAVKNAAGAASSQVAKLTDSELGAMA
HHHCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
EALAGAQYSQKQEYEADAYGVEFCVKNNIDPYGMYKSLNKLLELSNGAPASSYMQRMFSS
HHHHCCHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
HPDTAKRVARAKELADKYKQ
CCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2153656; 9278503; 1310091 [H]