| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345516
Identifier: 29345516
GI number: 29345516
Start: 99073
End: 99519
Strand: Reverse
Name: 29345516
Synonym: BT_0106
Alternate gene names: NA
Gene position: 99519-99073 (Counterclockwise)
Preceding gene: 29345517
Following gene: 29345508
Centisome position: 1.59
GC content: 43.85
Gene sequence:
>447_bases ATGCCGGAAAACGTTAAAAAGGAAATTTCGGCAGCTTATGAACAACCCGGTATATTTCTTGCCGGAGTGAATACCTATAA CATGATTTTTAAACGTTGGGGCGGATGGCCGTACAAAAGTAAAAAGACTTTTGTAGTGTCCCACTACGACACCAATGTGA CGAAAAAGGAGAATGTAACCTTTCTTACCGATATACCCTTACGGGCAATCAATGAACTTAAATCAAGTTCGGAAACCGAT ATTCAGGTCATTGGCGGCGGTAAGTTTATAACCTCGCTGATTGAAGCGTCCCTGCTGGATGAAATAACGCTGTATATCGT TCCGGTCATGCTTGGGGACGGTATCAAGTTTATAGGAAAGACTTTCGGGTCGAAGTGGGAACTGACCGGACACCGGGTGA TAGACAATCAGGTCGTTTACCTGACCTACCAGTATAAAGGAGAATGA
Upstream 100 bases:
>100_bases ACTAAAAACTGTTTGATACCAACTTATGAAACATTTAAAAACTTGTATTGCTGTATCTCTCGATGGCTTCATTGCCCGAA AAGATAATGATTTGGACTGG
Downstream 100 bases:
>100_bases TTTAAAAAAGCACCCGGTGTCCCTCCGGGTGCTTCAACCACAAAAATTTCAATTATAAATCTATCTATAATGAAACTTTC TGTGGCAAATATAACGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MPENVKKEISAAYEQPGIFLAGVNTYNMIFKRWGGWPYKSKKTFVVSHYDTNVTKKENVTFLTDIPLRAINELKSSSETD IQVIGGGKFITSLIEASLLDEITLYIVPVMLGDGIKFIGKTFGSKWELTGHRVIDNQVVYLTYQYKGE
Sequences:
>Translated_148_residues MPENVKKEISAAYEQPGIFLAGVNTYNMIFKRWGGWPYKSKKTFVVSHYDTNVTKKENVTFLTDIPLRAINELKSSSETD IQVIGGGKFITSLIEASLLDEITLYIVPVMLGDGIKFIGKTFGSKWELTGHRVIDNQVVYLTYQYKGE >Mature_147_residues PENVKKEISAAYEQPGIFLAGVNTYNMIFKRWGGWPYKSKKTFVVSHYDTNVTKKENVTFLTDIPLRAINELKSSSETDI QVIGGGKFITSLIEASLLDEITLYIVPVMLGDGIKFIGKTFGSKWELTGHRVIDNQVVYLTYQYKGE
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16734; Mature: 16603
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPENVKKEISAAYEQPGIFLAGVNTYNMIFKRWGGWPYKSKKTFVVSHYDTNVTKKENVT CCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEE FLTDIPLRAINELKSSSETDIQVIGGGKFITSLIEASLLDEITLYIVPVMLGDGIKFIGK EEECCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHEEHHHCCCHHHHHH TFGSKWELTGHRVIDNQVVYLTYQYKGE HCCCEEEECCCEEECCEEEEEEEEEECC >Mature Secondary Structure PENVKKEISAAYEQPGIFLAGVNTYNMIFKRWGGWPYKSKKTFVVSHYDTNVTKKENVT CCHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCEE FLTDIPLRAINELKSSSETDIQVIGGGKFITSLIEASLLDEITLYIVPVMLGDGIKFIGK EEECCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHEEHHHCCCHHHHHH TFGSKWELTGHRVIDNQVVYLTYQYKGE HCCCEEEECCCEEECCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA