| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345508
Identifier: 29345508
GI number: 29345508
Start: 89859
End: 90620
Strand: Reverse
Name: 29345508
Synonym: BT_0098
Alternate gene names: NA
Gene position: 90620-89859 (Counterclockwise)
Preceding gene: 29345516
Following gene: 29345507
Centisome position: 1.45
GC content: 48.03
Gene sequence:
>762_bases ATGAAGAAAGAAACCTTGTATGTGGCTTTCTCCACCCAAAAGGGCGGGGTCGGCAAAACAACATTCACCGTTTTGGTAGC AAGTTATCTGTATTATCTCAAAGGGTATAACGTGGCGGTCGTGGATTGCGATTACCCGCAGCACAGTATCAGTGCCATGC GCAAACGGGATGCCGAACAGGTGAACGGTGACGATTATTACAAACAGCTTGCTTTCAGCCAGTTCAAAACACTGGGAAAG AAAGCGTACCCGGTGTTGTGTAGTTCACCGGACGAAGCGATAAAAACGGCGGATGAATTTCTTGCGTCTGCCGGGTCGGA TTATGATGTGGTCTTTTTCGACCTGCCCGGAACGGTGAACAGTGAGGGTGTTATCAATTCGCTTTCAGGGGTGGACTACA TTTTCACTCCCATAGCCGCCGACCGGGTGGTATTGGAAAGCAGCCTTTCCTTTGCGGTAGCTATCAACAAACTGCTGGTA AAGAATGAAGCGTGCCGACTGAAAGGGCTGCACCTGTTTTGGAACATGGTAGATGGGCGGGAAAAAACAGACCTGTACAC CCTGTATGAACAGACCATCGGGGAACTGGAATTACCCCTTATGAAAGTATTTATCCCGGACACCAAAAGGTTTAAAAAGG AACTGGACGCACAACGTAAAACCGTGTTCCGTTCTACGCTGTTCCCGGCGGACAAACGGCTGGTAAAAGGCAGTAACATA GAAGAACTGATAACCGAAATCGCATACCTTATAAAACTGTAA
Upstream 100 bases:
>100_bases TTCCGGCTTTCGAGCTTTCAACATGGAACGAAAGAAAACCATCCGTCAATCTGTACGGATGGAATGAAATAAAGATGTAT CACAAAAAAGAATTATTACA
Downstream 100 bases:
>100_bases CGATATGGCAAAGCAAAGCGGCGGGAAACCGCAAATTGACGAGGATTTTATGAAAGAGATTATTTCACAGGGCTTGCCCG TGAAAAAACAGGAAACACCA
Product: conjugate transposon protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MKKETLYVAFSTQKGGVGKTTFTVLVASYLYYLKGYNVAVVDCDYPQHSISAMRKRDAEQVNGDDYYKQLAFSQFKTLGK KAYPVLCSSPDEAIKTADEFLASAGSDYDVVFFDLPGTVNSEGVINSLSGVDYIFTPIAADRVVLESSLSFAVAINKLLV KNEACRLKGLHLFWNMVDGREKTDLYTLYEQTIGELELPLMKVFIPDTKRFKKELDAQRKTVFRSTLFPADKRLVKGSNI EELITEIAYLIKL
Sequences:
>Translated_253_residues MKKETLYVAFSTQKGGVGKTTFTVLVASYLYYLKGYNVAVVDCDYPQHSISAMRKRDAEQVNGDDYYKQLAFSQFKTLGK KAYPVLCSSPDEAIKTADEFLASAGSDYDVVFFDLPGTVNSEGVINSLSGVDYIFTPIAADRVVLESSLSFAVAINKLLV KNEACRLKGLHLFWNMVDGREKTDLYTLYEQTIGELELPLMKVFIPDTKRFKKELDAQRKTVFRSTLFPADKRLVKGSNI EELITEIAYLIKL >Mature_253_residues MKKETLYVAFSTQKGGVGKTTFTVLVASYLYYLKGYNVAVVDCDYPQHSISAMRKRDAEQVNGDDYYKQLAFSQFKTLGK KAYPVLCSSPDEAIKTADEFLASAGSDYDVVFFDLPGTVNSEGVINSLSGVDYIFTPIAADRVVLESSLSFAVAINKLLV KNEACRLKGLHLFWNMVDGREKTDLYTLYEQTIGELELPLMKVFIPDTKRFKKELDAQRKTVFRSTLFPADKRLVKGSNI EELITEIAYLIKL
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28446; Mature: 28446
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKETLYVAFSTQKGGVGKTTFTVLVASYLYYLKGYNVAVVDCDYPQHSISAMRKRDAEQ CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH VNGDDYYKQLAFSQFKTLGKKAYPVLCSSPDEAIKTADEFLASAGSDYDVVFFDLPGTVN CCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCC SEGVINSLSGVDYIFTPIAADRVVLESSLSFAVAINKLLVKNEACRLKGLHLFWNMVDGR CCCHHHHHCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHHEEEECCCC EKTDLYTLYEQTIGELELPLMKVFIPDTKRFKKELDAQRKTVFRSTLFPADKRLVKGSNI CCHHHHHHHHHHHCHHCCCHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCH EELITEIAYLIKL HHHHHHHHHHHCC >Mature Secondary Structure MKKETLYVAFSTQKGGVGKTTFTVLVASYLYYLKGYNVAVVDCDYPQHSISAMRKRDAEQ CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHH VNGDDYYKQLAFSQFKTLGKKAYPVLCSSPDEAIKTADEFLASAGSDYDVVFFDLPGTVN CCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCC SEGVINSLSGVDYIFTPIAADRVVLESSLSFAVAINKLLVKNEACRLKGLHLFWNMVDGR CCCHHHHHCCCCEEECCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHHEEEECCCC EKTDLYTLYEQTIGELELPLMKVFIPDTKRFKKELDAQRKTVFRSTLFPADKRLVKGSNI CCHHHHHHHHHHHCHHCCCHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCH EELITEIAYLIKL HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA