| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29345507
Identifier: 29345507
GI number: 29345507
Start: 89417
End: 89854
Strand: Reverse
Name: 29345507
Synonym: BT_0097
Alternate gene names: NA
Gene position: 89854-89417 (Counterclockwise)
Preceding gene: 29345508
Following gene: 29345506
Centisome position: 1.44
GC content: 46.58
Gene sequence:
>438_bases ATGGCAAAGCAAAGCGGCGGGAAACCGCAAATTGACGAGGATTTTATGAAAGAGATTATTTCACAGGGCTTGCCCGTGAA AAAACAGGAAACACCATTGGTAACAGTGGAAACACCGGATAAGCCGGAAACAGTGAATAAGGAAGAAATCAAGGCAGAAC CTAAGGAAGAAAAGGCGGTGAAAGAACCTGCCCGCCGGAAAAAGAACACTCCGGGCGATTACCGGGAAACCTATTTCATG CGGGTGGACTTGACCGACCGACAACCGTTATATGTCAGCCGTACCACCCACGAAAAGCTAATGAAGATAGTAACTGTTAT TGGCGGACGCAAGGCAACCGTCAGCAGCTATGTAGAAAATATCCTGCTCCGTCATTTCGACCAGTTTCAGGACGAGATAA ACGAACTGTACGAAAGCAAATTTGAAAAGCCGTTTTGA
Upstream 100 bases:
>100_bases TTCCGTTCTACGCTGTTCCCGGCGGACAAACGGCTGGTAAAAGGCAGTAACATAGAAGAACTGATAACCGAAATCGCATA CCTTATAAAACTGTAACGAT
Downstream 100 bases:
>100_bases TATGTTGAAATGGTTTATTATCGGAACACTCCTGTATTACGCCGTTCTCTTATGGCGATACAGGGATAGCTTGGGAACAT GGTTCACGGGTGGGAAAAGA
Product: conjugate transposon protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MAKQSGGKPQIDEDFMKEIISQGLPVKKQETPLVTVETPDKPETVNKEEIKAEPKEEKAVKEPARRKKNTPGDYRETYFM RVDLTDRQPLYVSRTTHEKLMKIVTVIGGRKATVSSYVENILLRHFDQFQDEINELYESKFEKPF
Sequences:
>Translated_145_residues MAKQSGGKPQIDEDFMKEIISQGLPVKKQETPLVTVETPDKPETVNKEEIKAEPKEEKAVKEPARRKKNTPGDYRETYFM RVDLTDRQPLYVSRTTHEKLMKIVTVIGGRKATVSSYVENILLRHFDQFQDEINELYESKFEKPF >Mature_144_residues AKQSGGKPQIDEDFMKEIISQGLPVKKQETPLVTVETPDKPETVNKEEIKAEPKEEKAVKEPARRKKNTPGDYRETYFMR VDLTDRQPLYVSRTTHEKLMKIVTVIGGRKATVSSYVENILLRHFDQFQDEINELYESKFEKPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16875; Mature: 16744
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQSGGKPQIDEDFMKEIISQGLPVKKQETPLVTVETPDKPETVNKEEIKAEPKEEKAV CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCHHHHHH KEPARRKKNTPGDYRETYFMRVDLTDRQPLYVSRTTHEKLMKIVTVIGGRKATVSSYVEN HHHHHHCCCCCCCCHHEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHH ILLRHFDQFQDEINELYESKFEKPF HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AKQSGGKPQIDEDFMKEIISQGLPVKKQETPLVTVETPDKPETVNKEEIKAEPKEEKAV CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCHHHHHH KEPARRKKNTPGDYRETYFMRVDLTDRQPLYVSRTTHEKLMKIVTVIGGRKATVSSYVEN HHHHHHCCCCCCCCHHEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHH ILLRHFDQFQDEINELYESKFEKPF HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA