| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29345417
Identifier: 29345417
GI number: 29345417
Start: 4457
End: 4849
Strand: Reverse
Name: 29345417
Synonym: BT_0007
Alternate gene names: NA
Gene position: 4849-4457 (Counterclockwise)
Preceding gene: 29345431
Following gene: NA
Centisome position: 0.08
GC content: 36.64
Gene sequence:
>393_bases GTGCATCCTCCCCGAAGAGTATCGGAGTTTCTTTTATCGGTCTTGCCATTATTGCCTCCTTTCTCTATTGTTATCTGCAA AGGTAATGCTATTTATGCAAATACACAAACGGTCAAGGGGTTATCTTTATTTCCGTATATGTCCCATTCTGTCAAAGAGC GATTGTTTTTCAAGGCCAGAGCTATTTCTCCAATGACGATAGACAGCTCTGCCTTAAAGTCATTAAAAAAGGTTATCCCA GTGGATTTTCTTCTTGGTTTCTATTCCTTACGTGTTACTATATATGTCATTTTATTATTGTTAACACATAAAATTTCATG GTCTGCTTATTTCCAATGCCTCAATTGCATTTATCGTATCCTTAGGATATTCAAAATGCACGGAATCACATGA
Upstream 100 bases:
>100_bases TCTTTAAAAATGCTCATGATGTACTTATAATCCCGTTTTATCTCTTCCAGCTTTTCCGGAGTCTCTTTCGGTGGATTTTT CATCCGCGCTTCAAATCTCC
Downstream 100 bases:
>100_bases ATGCTCCACTCTGACCTCCGCAGATCGATATTCCTTTGACTTCTTGGGTGCATCCCACGATTTGTTACTCAAAAAGACAC GATACTCATAGATACATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MHPPRRVSEFLLSVLPLLPPFSIVICKGNAIYANTQTVKGLSLFPYMSHSVKERLFFKARAISPMTIDSSALKSLKKVIP VDFLLGFYSLRVTIYVILLLLTHKISWSAYFQCLNCIYRILRIFKMHGIT
Sequences:
>Translated_130_residues MHPPRRVSEFLLSVLPLLPPFSIVICKGNAIYANTQTVKGLSLFPYMSHSVKERLFFKARAISPMTIDSSALKSLKKVIP VDFLLGFYSLRVTIYVILLLLTHKISWSAYFQCLNCIYRILRIFKMHGIT >Mature_130_residues MHPPRRVSEFLLSVLPLLPPFSIVICKGNAIYANTQTVKGLSLFPYMSHSVKERLFFKARAISPMTIDSSALKSLKKVIP VDFLLGFYSLRVTIYVILLLLTHKISWSAYFQCLNCIYRILRIFKMHGIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14908; Mature: 14908
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPPRRVSEFLLSVLPLLPPFSIVICKGNAIYANTQTVKGLSLFPYMSHSVKERLFFKAR CCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH AISPMTIDSSALKSLKKVIPVDFLLGFYSLRVTIYVILLLLTHKISWSAYFQCLNCIYRI CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LRIFKMHGIT HHHHHHHCCC >Mature Secondary Structure MHPPRRVSEFLLSVLPLLPPFSIVICKGNAIYANTQTVKGLSLFPYMSHSVKERLFFKAR CCCHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH AISPMTIDSSALKSLKKVIPVDFLLGFYSLRVTIYVILLLLTHKISWSAYFQCLNCIYRI CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LRIFKMHGIT HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA