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The map label for this gene is yjhC [H]

Identifier: 29142218

GI number: 29142218

Start: 1846687

End: 1847790

Strand: Reverse

Name: yjhC [H]

Synonym: t1787

Alternate gene names: 29142218

Gene position: 1847790-1846687 (Counterclockwise)

Preceding gene: 29142219

Following gene: 29142217

Centisome position: 38.56

GC content: 46.74

Gene sequence:

>1104_bases
ATGACGAAATACGGTGTTATAGGTACAGGTTATTTTGGCGCTGAACTGGCGCGATTTATGTCTAAGGTTGAAGGGGCGAA
AATCACTGCGATTTACGATCCGGTAAATGCGGCTCCGATAGCGAAAGAGCTGAACTGTGTCGCCACTTCAACGATGGAGG
CGCTTTGTACCCATCCTGATGTGGATTGCGTAATTATTGCTTCACCAAATTACTTACATAAAGCGCCGGTCATTGCGGCG
GCTAAAGCGGGTAAACACGTGTTTTGTGAAAAACCTATCGCCTTAAATTACCAGGATTGTAAGGATATGGTTGATGCCTG
CAAAGAAGCTGGTGTTACCTTTATGGCGGGTCACGTTATGAACTTTTTTCACGGGGTTCGCCACGCTAAAGCGCTCATCA
AAGCCGGTGAAATCGGTGAAGTTACACAAGTTCACACTAAACGTAATGGTTTTGAAGACGTGCAGGATGAGATCTCATGG
AAGAAGATTCGCGCAAAGTCAGGTGGGCATCTGTACCATCACATTCACGAGCTAGATTGTACACTGTTCATCATGGATGA
AACCCCATCCCTGGTTTCAATGGCGGCGGGGAATGTTGCGCACAAAGGTGAAAAATTTGGTGATGAAGATGATGTTGTCC
TAATCACCCTTGAGTTTGAAAGCGGTCGTTTCGCGACACTTCAGTGGGGATCATCGTTCCACTACCCTGAGCACTATGTA
TTAATTGAGGGCACGACAGGTGCAATTCTCATTGATATGCAAAACACGGCTGGTTATCTAATAAAAGCGGGCAAAAAAAC
ACACTTTCTTGTGCATGAAAGCCAGGCGGAGGATGATGATCGTCGCAACGGTAACATATCCAGCGAGATGGATGGCGCAA
TCGCTTATGGTAAACCCGGTAAACGTACGCCGATGTGGCTCTCATCAATTATGAAACTGGAGATGCAGTACTTGCATGAT
GTGATAAACGGTCTGGAGCCAGGCGAGGAGTTTGCTAAATTGCTAACGGGAGAAGCGGCGACAAATGCCATTGCTACCGC
TGATGCTGCGACGCTTTCTTCAAACGAGGGGCGCAAAGTTAAACTCACTGAAATTCTTGGCTAA

Upstream 100 bases:

>100_bases
GCAACAATTCTACTCATTATTGGCCTATCCATTCCGGATAGACTAAAAGCACGTCGTGAAAGGTTTCAGTCAACAAAAGA
ATTTTAATAGAGGATAAATG

Downstream 100 bases:

>100_bases
AATTTAAAGCCGGATGGTGGTGTTATTGGCCGGTGGCGCTGCGCTTATGTAGACTGGATAAGGCGCCCGTGAACTGTGCC
GCCATCCGGCAATGGACGGG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MTKYGVIGTGYFGAELARFMSKVEGAKITAIYDPVNAAPIAKELNCVATSTMEALCTHPDVDCVIIASPNYLHKAPVIAA
AKAGKHVFCEKPIALNYQDCKDMVDACKEAGVTFMAGHVMNFFHGVRHAKALIKAGEIGEVTQVHTKRNGFEDVQDEISW
KKIRAKSGGHLYHHIHELDCTLFIMDETPSLVSMAAGNVAHKGEKFGDEDDVVLITLEFESGRFATLQWGSSFHYPEHYV
LIEGTTGAILIDMQNTAGYLIKAGKKTHFLVHESQAEDDDRRNGNISSEMDGAIAYGKPGKRTPMWLSSIMKLEMQYLHD
VINGLEPGEEFAKLLTGEAATNAIATADAATLSSNEGRKVKLTEILG

Sequences:

>Translated_367_residues
MTKYGVIGTGYFGAELARFMSKVEGAKITAIYDPVNAAPIAKELNCVATSTMEALCTHPDVDCVIIASPNYLHKAPVIAA
AKAGKHVFCEKPIALNYQDCKDMVDACKEAGVTFMAGHVMNFFHGVRHAKALIKAGEIGEVTQVHTKRNGFEDVQDEISW
KKIRAKSGGHLYHHIHELDCTLFIMDETPSLVSMAAGNVAHKGEKFGDEDDVVLITLEFESGRFATLQWGSSFHYPEHYV
LIEGTTGAILIDMQNTAGYLIKAGKKTHFLVHESQAEDDDRRNGNISSEMDGAIAYGKPGKRTPMWLSSIMKLEMQYLHD
VINGLEPGEEFAKLLTGEAATNAIATADAATLSSNEGRKVKLTEILG
>Mature_366_residues
TKYGVIGTGYFGAELARFMSKVEGAKITAIYDPVNAAPIAKELNCVATSTMEALCTHPDVDCVIIASPNYLHKAPVIAAA
KAGKHVFCEKPIALNYQDCKDMVDACKEAGVTFMAGHVMNFFHGVRHAKALIKAGEIGEVTQVHTKRNGFEDVQDEISWK
KIRAKSGGHLYHHIHELDCTLFIMDETPSLVSMAAGNVAHKGEKFGDEDDVVLITLEFESGRFATLQWGSSFHYPEHYVL
IEGTTGAILIDMQNTAGYLIKAGKKTHFLVHESQAEDDDRRNGNISSEMDGAIAYGKPGKRTPMWLSSIMKLEMQYLHDV
INGLEPGEEFAKLLTGEAATNAIATADAATLSSNEGRKVKLTEILG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=366, Percent_Identity=62.2950819672131, Blast_Score=502, Evalue=1e-143,
Organism=Drosophila melanogaster, GI24581117, Length=225, Percent_Identity=27.5555555555556, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40020; Mature: 39889

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYGVIGTGYFGAELARFMSKVEGAKITAIYDPVNAAPIAKELNCVATSTMEALCTHPD
CCCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
VDCVIIASPNYLHKAPVIAAAKAGKHVFCEKPIALNYQDCKDMVDACKEAGVTFMAGHVM
CCEEEEECCCCCHHCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEHHHHH
NFFHGVRHAKALIKAGEIGEVTQVHTKRNGFEDVQDEISWKKIRAKSGGHLYHHIHELDC
HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCE
TLFIMDETPSLVSMAAGNVAHKGEKFGDEDDVVLITLEFESGRFATLQWGSSFHYPEHYV
EEEEEECCCHHHHHHCCCHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEE
LIEGTTGAILIDMQNTAGYLIKAGKKTHFLVHESQAEDDDRRNGNISSEMDGAIAYGKPG
EEECCCCEEEEEECCCCCEEEECCCCEEEEEECCCCCCCHHCCCCCCCCCCCEEEECCCC
KRTPMWLSSIMKLEMQYLHDVINGLEPGEEFAKLLTGEAATNAIATADAATLSSNEGRKV
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCHHHHCCHHCCCCCCCCEE
KLTEILG
EEEECCC
>Mature Secondary Structure 
TKYGVIGTGYFGAELARFMSKVEGAKITAIYDPVNAAPIAKELNCVATSTMEALCTHPD
CCCEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCC
VDCVIIASPNYLHKAPVIAAAKAGKHVFCEKPIALNYQDCKDMVDACKEAGVTFMAGHVM
CCEEEEECCCCCHHCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEHHHHH
NFFHGVRHAKALIKAGEIGEVTQVHTKRNGFEDVQDEISWKKIRAKSGGHLYHHIHELDC
HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCE
TLFIMDETPSLVSMAAGNVAHKGEKFGDEDDVVLITLEFESGRFATLQWGSSFHYPEHYV
EEEEEECCCHHHHHHCCCHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEE
LIEGTTGAILIDMQNTAGYLIKAGKKTHFLVHESQAEDDDRRNGNISSEMDGAIAYGKPG
EEECCCCEEEEEECCCCCEEEECCCCEEEEEECCCCCCCHHCCCCCCCCCCCEEEECCCC
KRTPMWLSSIMKLEMQYLHDVINGLEPGEEFAKLLTGEAATNAIATADAATLSSNEGRKV
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCHHHHCCHHCCCCCCCCEE
KLTEILG
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]