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The map label for this gene is yjhB [H]

Identifier: 29142219

GI number: 29142219

Start: 1847804

End: 1849084

Strand: Reverse

Name: yjhB [H]

Synonym: t1788

Alternate gene names: 29142219

Gene position: 1849084-1847804 (Counterclockwise)

Preceding gene: 29142220

Following gene: 29142218

Centisome position: 38.59

GC content: 45.12

Gene sequence:

>1281_bases
GTGATAGCAAAATTCTTCCCGTGGTATAGCGAGATAACACGTCCACAAAAAAATGCTTTATTTTCAGCATGGCTGGGTTA
CGTTTTTGATGGCTTCGACTTTATGCTGATTTTCTACATTATGTATCTGATCAAGGCTGACTTAGGATTGACAGATATGG
AGGGCGCATTCCTTGCCACAGCGGCCTTTATTGGGCGACCATTTGGCGGGGCGCTATTTGGTCTGCTGGCAGACAAATTT
GGCCGTAAGCCGTTAATGATGTGGTCGATAGTTGCCTATTCTGTAGGTACAGGGTTAAGTGGCCTGGCTTCCGGTGTAAT
TATGCTGACGCTTAGTCGTTTTATTGTCGGTATGGGGATGGCGGGGAAGTATGCTTGCGCTTCTACTTATGCCGTGGAAA
GTTGGCCAAAGCATTTAAAATCTAAAGCGAGCGCATTTCTGGTTTCAGGTTTCGGTATTGGTAACATCATAGCAGCCTAT
TTTATGCCGTCATTTGCCGAAGCGTATGGTTGGCGTGCTGCTTTTTTTGTCGGTTTGCTACCCGTTCTTTTAGTAATCTA
CATCCGGGCCAGGGCTCCTGAATCTAAAGAGTGGGAAGAAGCCAAACTCAGTGGTCTCGGAAAGCATTCACAAAGTGCCT
GGTCAGTTTTCTCTTTGTCAATGAAAGGGCTATTTAATCGAGCTCAATTTCCACTGACATTATGTGTATTTATTGTTCTG
TTCTCTATTTTCGGCGCAAACTGGCCGATCTTTGGTCTACTGCCTACATATTTGGCGGGAGAGGGCTTTGATACGGGCGT
GGTCTCTAATTTAATGACGGCGGCGGCATTCGGCACTGTATTGGGAAATATCGTTTGGGGTCTGTGCGCAGATAGAATTG
GTTTGAAGAAAACGTTCAGCATTGGTCTTCTCATGTCCTTTTTATTCATTTTCCCGTTATTCAGAATTCCGCAAGATAAT
TATTTACTGCTGGGCGCATGTTTATTCGGTTTAATGGCGACTAACGTAGGTGTTGGCGGGCTGGTTCCCAAATTTCTCTA
CGACTACTTTCCTCTTGAGGTTCGTGGTTTGGGTACCGGGCTTATTTATAATCTTGCTGCGACATCAGGCACATTCAATT
CAATGGCGGCGACCTGGCTTGGAATAACAATGGGGCTAGGCGCTGCGCTAACGTTCATTGTTGCTTTCTGGACCGCAACA
ATTCTACTCATTATTGGCCTATCCATTCCGGATAGACTAAAAGCACGTCGTGAAAGGTTTCAGTCAACAAAAGAATTTTA
A

Upstream 100 bases:

>100_bases
CGGAAAGTGCCGGTTGATAGTGTCTTATTCGGCAATTGATATGACTTAAAAATTAATTCCGTAAGCATTTCAGACGGTAA
CAGCAAATAAGGGTTTTATT

Downstream 100 bases:

>100_bases
TAGAGGATAAATGATGACGAAATACGGTGTTATAGGTACAGGTTATTTTGGCGCTGAACTGGCGCGATTTATGTCTAAGG
TTGAAGGGGCGAAAATCACT

Product: sialic acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MIAKFFPWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF
GRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGKYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAY
FMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGLGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVL
FSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDN
YLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTAT
ILLIIGLSIPDRLKARRERFQSTKEF

Sequences:

>Translated_426_residues
MIAKFFPWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF
GRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGKYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAY
FMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGLGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVL
FSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDN
YLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTAT
ILLIIGLSIPDRLKARRERFQSTKEF
>Mature_426_residues
MIAKFFPWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF
GRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGKYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAY
FMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGLGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVL
FSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDN
YLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTAT
ILLIIGLSIPDRLKARRERFQSTKEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082404, Length=406, Percent_Identity=57.1428571428571, Blast_Score=473, Evalue=1e-135,
Organism=Escherichia coli, GI87082231, Length=452, Percent_Identity=34.7345132743363, Blast_Score=267, Evalue=8e-73,
Organism=Escherichia coli, GI1790550, Length=392, Percent_Identity=22.7040816326531, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1788292, Length=396, Percent_Identity=24.4949494949495, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788942, Length=389, Percent_Identity=24.6786632390745, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789941, Length=458, Percent_Identity=24.235807860262, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI32564663, Length=209, Percent_Identity=25.8373205741627, Blast_Score=65, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6322632, Length=331, Percent_Identity=25.6797583081571, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 46547; Mature: 46547

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAKFFPWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLAT
CCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
AAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGM
HHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
AGKYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVLLVIYIRARAPESKEWEEAKLSGLGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVL
HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
FSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFS
HHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
IGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTG
HHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCH
LIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTATILLIIGLSIPDRLKARRERF
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QSTKEF
HHCCCC
>Mature Secondary Structure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HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]