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The map label for this gene is ydgI [H]

Identifier: 29141802

GI number: 29141802

Start: 1406555

End: 1407937

Strand: Reverse

Name: ydgI [H]

Synonym: t1345

Alternate gene names: 29141802

Gene position: 1407937-1406555 (Counterclockwise)

Preceding gene: 29141803

Following gene: 29141800

Centisome position: 29.38

GC content: 54.74

Gene sequence:

>1383_bases
ATGGAAAAAAAACTGGGACTGAGCGCGCTGACCGCGCTGGTTTTAAGCTCAATGCTTGGCGCAGGTGTTTTCAGTCTGCC
CCAGAATATGGCCGCCGTTGCCAGTCCGGCTGCGTTGTTAATTGGCTGGGCCATTACCGGCGTGGGGATACTCCTACTGG
CATTCGCCATGTTAATCCTTACGCGCATTCGCTCCGAGCTTGACGGCGGCATCTTTACTTACGCCCGCGAAGGCTTCGGC
GAACTGATTGGCTTTTGTTCTGCCTGGGGCTATTGGCTGTGCGCGGTCATCGCCAACGTATCCTATTTGGTTATCGTCTT
TTCAGCGCTGAGTTTCTTTACCGATACGCCTGCCCTGCGTCTGTTTGGCGACGGTAATACCTGGCAGGCTATTGTCGGCG
CTTCAGTCCTGCTCTGGATTGTCCATTTCCTCATCCTGCGCGGCGTACAAACGGCAGCCAGCATCAATCTGGTCGCGACT
CTGGCGAAACTGTTACCGCTCGGCGCGTTTATTGTGCTGGCTATCATGATGTTCAAACTGGATACCTTCACACTGGACTT
CACCGGTGTTGAGCTCGGTATTCCCGTATGGGAACAGGTCAAGAACACCATGCTTATTACGCTGTGGGTGTTTATTGGCG
TTGAAGGCGCCGTCGTCGTCTCGGCCCGAGCGAAAAATAAACGCGATGTAGGCCGCGCCACGCTACTGGCGGTACTCGCA
GCGCTGGGAATATATCTCCTGGTCACGCTGCTTTCTCTTGGCGTTCTTGCGCGTCCGGAACTGGCGGAGATGCGCAACCC
GTCGATGGCCGGTCTGATGGTGAAAATGATGGGGCCGTGGGGAGAAATTATTATTGCAGCGGGACTGATTGTGTCTGTCT
GCGGGGCTTATCTAAGCTGGACTATCATGGCGGCAGAGGTGCCGTTTCTGGCGGCAGCCTATAAATCCTTCCCGGGCATC
TTCGCGCGACAAAATGCGCAAGGCGCGCCTTCTGCGTCGTTATGGCTCACCAACATCTGTGTGCAAATCTGTCTGGTGCT
GATCTGGCTGACCGGTTCGGACTACAACACACTATTGACGATTGCGTCAGAAATGATTCTGGTGCCCTACTTTCTGGTCG
GCGCATTTCTGCTGAAGATTGCAACGCGTCCCCTCCATCGGGCGGTCGGTATCGGAGCCTGTATTTATGGCTTATGGTTA
TTATATGCGTCGGGCCCTATGCACCTGCTGCTGTCCGTCGTACTGTACGCGCCTGGATTACTGGTTTTCCTGTATGCGCG
TCGGACGCACAAGCATGACAATGTATTAAATCGTCAGGAAGTCGTGCTGATTGGTTTATTGCTGGTCGCGGCGGTTCCGG
CTACGTGGATGCTGGTGGGTTAA

Upstream 100 bases:

>100_bases
CTTCTCTCCGTAAAATCCCGCGCCTTAGTGGCTTTCACCATTTTTATGCGTTTTGCCATAATAATTATTCTTCCAATTTC
ATTTTTATAGCTGGATACCA

Downstream 100 bases:

>100_bases
CAACCTCCCTATCGTAATATCCGTCTGTATTACGATGGGGAAACCACGGTCTTTGCCAATATTAATGCCATTTAATCCAG
CAAAAAATCAGCAGCCACGC

Product: amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWAITGVGILLLAFAMLILTRIRSELDGGIFTYAREGFG
ELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPALRLFGDGNTWQAIVGASVLLWIVHFLILRGVQTAASINLVAT
LAKLLPLGAFIVLAIMMFKLDTFTLDFTGVELGIPVWEQVKNTMLITLWVFIGVEGAVVVSARAKNKRDVGRATLLAVLA
ALGIYLLVTLLSLGVLARPELAEMRNPSMAGLMVKMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAAAYKSFPGI
FARQNAQGAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHRAVGIGACIYGLWL
LYASGPMHLLLSVVLYAPGLLVFLYARRTHKHDNVLNRQEVVLIGLLLVAAVPATWMLVG

Sequences:

>Translated_460_residues
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWAITGVGILLLAFAMLILTRIRSELDGGIFTYAREGFG
ELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPALRLFGDGNTWQAIVGASVLLWIVHFLILRGVQTAASINLVAT
LAKLLPLGAFIVLAIMMFKLDTFTLDFTGVELGIPVWEQVKNTMLITLWVFIGVEGAVVVSARAKNKRDVGRATLLAVLA
ALGIYLLVTLLSLGVLARPELAEMRNPSMAGLMVKMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAAAYKSFPGI
FARQNAQGAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHRAVGIGACIYGLWL
LYASGPMHLLLSVVLYAPGLLVFLYARRTHKHDNVLNRQEVVLIGLLLVAAVPATWMLVG
>Mature_460_residues
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWAITGVGILLLAFAMLILTRIRSELDGGIFTYAREGFG
ELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPALRLFGDGNTWQAIVGASVLLWIVHFLILRGVQTAASINLVAT
LAKLLPLGAFIVLAIMMFKLDTFTLDFTGVELGIPVWEQVKNTMLITLWVFIGVEGAVVVSARAKNKRDVGRATLLAVLA
ALGIYLLVTLLSLGVLARPELAEMRNPSMAGLMVKMMGPWGEIIIAAGLIVSVCGAYLSWTIMAAEVPFLAAAYKSFPGI
FARQNAQGAPSASLWLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHRAVGIGACIYGLWL
LYASGPMHLLLSVVLYAPGLLVFLYARRTHKHDNVLNRQEVVLIGLLLVAAVPATWMLVG

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=460, Percent_Identity=92.8260869565217, Blast_Score=857, Evalue=0.0,
Organism=Escherichia coli, GI2367353, Length=457, Percent_Identity=29.9781181619256, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1786908, Length=423, Percent_Identity=27.6595744680851, Blast_Score=108, Evalue=6e-25,
Organism=Escherichia coli, GI1790575, Length=442, Percent_Identity=22.6244343891403, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293
- InterPro:   IPR004754 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49418; Mature: 49418

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWAITGVGILLLAFAMLIL
CCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
TRIRSELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPALR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LFGDGNTWQAIVGASVLLWIVHFLILRGVQTAASINLVATLAKLLPLGAFIVLAIMMFKL
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTFTLDFTGVELGIPVWEQVKNTMLITLWVFIGVEGAVVVSARAKNKRDVGRATLLAVLA
HHEEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
ALGIYLLVTLLSLGVLARPELAEMRNPSMAGLMVKMMGPWGEIIIAAGLIVSVCGAYLSW
HHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TIMAAEVPFLAAAYKSFPGIFARQNAQGAPSASLWLTNICVQICLVLIWLTGSDYNTLLT
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IASEMILVPYFLVGAFLLKIATRPLHRAVGIGACIYGLWLLYASGPMHLLLSVVLYAPGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LVFLYARRTHKHDNVLNRQEVVLIGLLLVAAVPATWMLVG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHEECC
>Mature Secondary Structure
MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWAITGVGILLLAFAMLIL
CCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
TRIRSELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSYLVIVFSALSFFTDTPALR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LFGDGNTWQAIVGASVLLWIVHFLILRGVQTAASINLVATLAKLLPLGAFIVLAIMMFKL
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTFTLDFTGVELGIPVWEQVKNTMLITLWVFIGVEGAVVVSARAKNKRDVGRATLLAVLA
HHEEEEECCCEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHH
ALGIYLLVTLLSLGVLARPELAEMRNPSMAGLMVKMMGPWGEIIIAAGLIVSVCGAYLSW
HHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
TIMAAEVPFLAAAYKSFPGIFARQNAQGAPSASLWLTNICVQICLVLIWLTGSDYNTLLT
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IASEMILVPYFLVGAFLLKIATRPLHRAVGIGACIYGLWLLYASGPMHLLLSVVLYAPGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LVFLYARRTHKHDNVLNRQEVVLIGLLLVAAVPATWMLVG
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]