Definition Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome.
Accession NC_004631
Length 4,791,961

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The map label for this gene is nfdA [H]

Identifier: 29141797

GI number: 29141797

Start: 1401809

End: 1403515

Strand: Reverse

Name: nfdA [H]

Synonym: t1340

Alternate gene names: 29141797

Gene position: 1403515-1401809 (Counterclockwise)

Preceding gene: 29141798

Following gene: 29141796

Centisome position: 29.29

GC content: 57.23

Gene sequence:

>1707_bases
ATGCTAATGATCAGTCTCGTCCCGCCTCTGCTTTCCAGAACCGCGCTTCTCTTTCTGCTCACGGCCACAGGCGCAGCCAC
CGCCGCCCGCCCGGCAGCGGATATTATTTTGCATAACGGTAATATCATCACTCTGAATGATGCCCAGCCGCAGGCCAGCG
CGCTGGCGATTTCCGGCTCGCGGATTGTGGCGATTGGCGATGATACGGCGACAAATGAATGGCGCGGCGACCATACCCGT
ACCATCGATTTACAGGGTAAAACCGTGATACCCGGCCTGACCGATACCCATATTCACGCCATTCGCGGCGGACAAACCTG
GACATTCGAAACCTACTGGTACGACAGCCCTTCGCTTAAAGACGCGCTGGATAAATTACGCGCCGACGCTAACCGTCGTC
CCCACGATCAATGGGTAGCCGTAGTGGGATCATGGATACCGGCGCAATTTGCAGAAAACCGGGCGTCGACGGTAGCCGAA
CTGAGCCACGCCCTTCCCGATCATCCGGCTTATATTCAGTATCTTTACGACTATGCGTTAGTGAATCAGCGCGGTATAGA
CGTACTTGGCCTTAACGACACCCCTCCTCCTGATTTAGCGGGAATCCGCGTAGAGCGCGACGCAAAAGGTAGCGCCACGG
GGAAATTATTTGGTGACATCGCCGCGTTTAACCAGCTTTTTGCCAGCATAAGTAGTAACGCCGATCGCGAGGGCGGTCTG
CGACAATTTTTCGCTGATATGAACGCTCGCGGCGTGACCGGCATCATTGACCCCTCTGCCGGGCCTGCCGCCGCTTATGA
GCCTTTATTTGCAATGCGAAACCAGGGGGATTTACCGCTGCGCGTGGGGTATCGCATTCCGGTACAGCCGGAAGCGAAAG
GTCATGAAGCGCAGTGGTTCAGCAACCTGATGGCCTTTCGCCCGGCGCGTGCCGACGACGGGCAACTGGCTTTTCTTGGC
CTGGGGGAAAGCCTGGTGGCAGGAATGAATGACGGCGTGCGGATGGCCCCAGGGTTTTCTTCCTCAGAGCAGGACAAAAC
CGCGCTTCGCCAGGTCGCGACGTTTGCGGCAAAACGGGGAATACCGCTTGAGATCCACGCCTATACCGATGACAGCGCCG
ACGCGATATTGACGATTTTTGAGCAGGTAGCGCAGCAGTACGATCTGCGCCCTCTCCGCTGGTCTATTGCGCATCTGAAT
ACCGGTTCGCCACAGACACTTGAGCGAATGCGTAAGCTGGGTCTGGCATACACTGTGCAAATGGGGCCTTACTTTGAGGG
GCTTGCCATCCGTGACGCCAACCCACCCGGTGCGACGGACAATTCGCCGCCGGTTCGACTGGCGCTGGATAAAGGGCTTG
TCGTAGCTGGCGGCACCGATTCGACGCGTATTGGCATTGCCGGTGTCTGGCACGCTATCGAATATCATATCACCGGTATA
GCGTCAGGCGGTTCCGTGCGTAAACCCGCCAGCGAGCGGCTCACGCGTCTGGAAGCGCTAGCGTTATATACACGTCATGC
CGCCTGGCTCGCCTTTGCCGAACAACACCGGGGCCAGCTTAGCGTCGGAAAACAGGCCGATCTGGCGGTGCTCAATCAGC
CCTTTATGACGATGCCGGAAGACAGAATTGATACCATTCGCGCTGTTTTGACGCTTGTCGATGGACGCATTGTTCACGAA
AGTCCGGACCTTAACGCCGGACAATGA

Upstream 100 bases:

>100_bases
ATCACCACCGTTCTAAAAACAGAACGCACTGTTCCCTGGGCACAGATTGAACAATTCTTGTTCGCTCTCTATGGTTTGCT
TATCTCCCGACAAAAGGAAC

Downstream 100 bases:

>100_bases
GGTTGTCAGTTGACGCAAAGCCTGCTTTTATAACCCACCAGCGGCGCTGACGGGAAATCTTTTCCGTCAGCGCGCGATAG
AGCTAATGTATTGAGATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MLMISLVPPLLSRTALLFLLTATGAATAARPAADIILHNGNIITLNDAQPQASALAISGSRIVAIGDDTATNEWRGDHTR
TIDLQGKTVIPGLTDTHIHAIRGGQTWTFETYWYDSPSLKDALDKLRADANRRPHDQWVAVVGSWIPAQFAENRASTVAE
LSHALPDHPAYIQYLYDYALVNQRGIDVLGLNDTPPPDLAGIRVERDAKGSATGKLFGDIAAFNQLFASISSNADREGGL
RQFFADMNARGVTGIIDPSAGPAAAYEPLFAMRNQGDLPLRVGYRIPVQPEAKGHEAQWFSNLMAFRPARADDGQLAFLG
LGESLVAGMNDGVRMAPGFSSSEQDKTALRQVATFAAKRGIPLEIHAYTDDSADAILTIFEQVAQQYDLRPLRWSIAHLN
TGSPQTLERMRKLGLAYTVQMGPYFEGLAIRDANPPGATDNSPPVRLALDKGLVVAGGTDSTRIGIAGVWHAIEYHITGI
ASGGSVRKPASERLTRLEALALYTRHAAWLAFAEQHRGQLSVGKQADLAVLNQPFMTMPEDRIDTIRAVLTLVDGRIVHE
SPDLNAGQ

Sequences:

>Translated_568_residues
MLMISLVPPLLSRTALLFLLTATGAATAARPAADIILHNGNIITLNDAQPQASALAISGSRIVAIGDDTATNEWRGDHTR
TIDLQGKTVIPGLTDTHIHAIRGGQTWTFETYWYDSPSLKDALDKLRADANRRPHDQWVAVVGSWIPAQFAENRASTVAE
LSHALPDHPAYIQYLYDYALVNQRGIDVLGLNDTPPPDLAGIRVERDAKGSATGKLFGDIAAFNQLFASISSNADREGGL
RQFFADMNARGVTGIIDPSAGPAAAYEPLFAMRNQGDLPLRVGYRIPVQPEAKGHEAQWFSNLMAFRPARADDGQLAFLG
LGESLVAGMNDGVRMAPGFSSSEQDKTALRQVATFAAKRGIPLEIHAYTDDSADAILTIFEQVAQQYDLRPLRWSIAHLN
TGSPQTLERMRKLGLAYTVQMGPYFEGLAIRDANPPGATDNSPPVRLALDKGLVVAGGTDSTRIGIAGVWHAIEYHITGI
ASGGSVRKPASERLTRLEALALYTRHAAWLAFAEQHRGQLSVGKQADLAVLNQPFMTMPEDRIDTIRAVLTLVDGRIVHE
SPDLNAGQ
>Mature_568_residues
MLMISLVPPLLSRTALLFLLTATGAATAARPAADIILHNGNIITLNDAQPQASALAISGSRIVAIGDDTATNEWRGDHTR
TIDLQGKTVIPGLTDTHIHAIRGGQTWTFETYWYDSPSLKDALDKLRADANRRPHDQWVAVVGSWIPAQFAENRASTVAE
LSHALPDHPAYIQYLYDYALVNQRGIDVLGLNDTPPPDLAGIRVERDAKGSATGKLFGDIAAFNQLFASISSNADREGGL
RQFFADMNARGVTGIIDPSAGPAAAYEPLFAMRNQGDLPLRVGYRIPVQPEAKGHEAQWFSNLMAFRPARADDGQLAFLG
LGESLVAGMNDGVRMAPGFSSSEQDKTALRQVATFAAKRGIPLEIHAYTDDSADAILTIFEQVAQQYDLRPLRWSIAHLN
TGSPQTLERMRKLGLAYTVQMGPYFEGLAIRDANPPGATDNSPPVRLALDKGLVVAGGTDSTRIGIAGVWHAIEYHITGI
ASGGSVRKPASERLTRLEALALYTRHAAWLAFAEQHRGQLSVGKQADLAVLNQPFMTMPEDRIDTIRAVLTLVDGRIVHE
SPDLNAGQ

Specific function: Hydrolyzes N-substituted formamides, but not amides. N- benzylformamide is the preferred substrate, while N-butylformamide is hydrolyzed at a much lower rate. Has very low activity towards allylformamide, N-(2-cyclohex-1-enylethyl)formamide and N-(alpha-

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.1.91 [H]

Molecular weight: Translated: 61439; Mature: 61439

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMISLVPPLLSRTALLFLLTATGAATAARPAADIILHNGNIITLNDAQPQASALAISGS
CEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCEEEECCCCCCCCEEEECCC
RIVAIGDDTATNEWRGDHTRTIDLQGKTVIPGLTDTHIHAIRGGQTWTFETYWYDSPSLK
EEEEECCCCCCCCCCCCCEEEEEECCCEECCCCCCCEEEEEECCCEEEEEEEEECCCCHH
DALDKLRADANRRPHDQWVAVVGSWIPAQFAENRASTVAELSHALPDHPAYIQYLYDYAL
HHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VNQRGIDVLGLNDTPPPDLAGIRVERDAKGSATGKLFGDIAAFNQLFASISSNADREGGL
HCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
RQFFADMNARGVTGIIDPSAGPAAAYEPLFAMRNQGDLPLRVGYRIPVQPEAKGHEAQWF
HHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEECEECCCCCCCCCCHHHHH
SNLMAFRPARADDGQLAFLGLGESLVAGMNDGVRMAPGFSSSEQDKTALRQVATFAAKRG
HHHHHHCCCCCCCCCEEEEECCHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCC
IPLEIHAYTDDSADAILTIFEQVAQQYDLRPLRWSIAHLNTGSPQTLERMRKLGLAYTVQ
CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEE
MGPYFEGLAIRDANPPGATDNSPPVRLALDKGLVVAGGTDSTRIGIAGVWHAIEYHITGI
ECCCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEECCCCCCEEEHHHHHHEEEEEEEEE
ASGGSVRKPASERLTRLEALALYTRHAAWLAFAEQHRGQLSVGKQADLAVLNQPFMTMPE
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCH
DRIDTIRAVLTLVDGRIVHESPDLNAGQ
HHHHHHHHHHHHHCCEEEECCCCCCCCC
>Mature Secondary Structure
MLMISLVPPLLSRTALLFLLTATGAATAARPAADIILHNGNIITLNDAQPQASALAISGS
CEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEECCCEEEECCCCCCCCEEEECCC
RIVAIGDDTATNEWRGDHTRTIDLQGKTVIPGLTDTHIHAIRGGQTWTFETYWYDSPSLK
EEEEECCCCCCCCCCCCCEEEEEECCCEECCCCCCCEEEEEECCCEEEEEEEEECCCCHH
DALDKLRADANRRPHDQWVAVVGSWIPAQFAENRASTVAELSHALPDHPAYIQYLYDYAL
HHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
VNQRGIDVLGLNDTPPPDLAGIRVERDAKGSATGKLFGDIAAFNQLFASISSNADREGGL
HCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
RQFFADMNARGVTGIIDPSAGPAAAYEPLFAMRNQGDLPLRVGYRIPVQPEAKGHEAQWF
HHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCEEECEECCCCCCCCCCHHHHH
SNLMAFRPARADDGQLAFLGLGESLVAGMNDGVRMAPGFSSSEQDKTALRQVATFAAKRG
HHHHHHCCCCCCCCCEEEEECCHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCC
IPLEIHAYTDDSADAILTIFEQVAQQYDLRPLRWSIAHLNTGSPQTLERMRKLGLAYTVQ
CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEEE
MGPYFEGLAIRDANPPGATDNSPPVRLALDKGLVVAGGTDSTRIGIAGVWHAIEYHITGI
ECCCCCCEEEECCCCCCCCCCCCCEEEEECCCEEEECCCCCCEEEHHHHHHEEEEEEEEE
ASGGSVRKPASERLTRLEALALYTRHAAWLAFAEQHRGQLSVGKQADLAVLNQPFMTMPE
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCH
DRIDTIRAVLTLVDGRIVHESPDLNAGQ
HHHHHHHHHHHHHCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA