| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is resA [H]
Identifier: 28572909
GI number: 28572909
Start: 864901
End: 865533
Strand: Direct
Name: resA [H]
Synonym: TW768
Alternate gene names: 28572909
Gene position: 864901-865533 (Clockwise)
Preceding gene: 28572908
Following gene: 28572910
Centisome position: 93.41
GC content: 44.39
Gene sequence:
>633_bases TTGTGTCTTTCGGGTAATCCCCGGAATTGTGTCCTGTTTTCTGTATCGCTTCTGTTGGTTCTTTCTTCGGTAATTTTGTC TGGGTGTTTTTATTCCGACACACAGACCCAGACAGACTCTGGTGAATATCTTGCCGGGGTGGTAAAGGTTGTAGCCCCAG AGAATCGTGTCACACGGGTTAAATTCTCCGAAAAGGCTATTGATCCAGATGGACAGGAGAGCACTTATAATTCCGTTTCA TACGCAGGAAAGGTGCAAGTAGTAAATTTCTGGTATGCCGCATGCCCTCCGTGTCGTGAAGAGGCGCCAATTCTGGAGGA GGTGTGGAGCGAATTCAAAACTCAAAATGTTCAGTTTATCGGCGTCAATATTCGTGATAATGCAGATGTCATAAAGGCAT TTGCGAGAAAATTTAAAATCACTTTTCCATCAATCATAGATGTGCAAAACGCGTCTGTGCGGCTTGCATTTGCTGGGCAA ATTCCCCCGAATGGGGTGCCAGTTACGTACGTGCTGGATAAAAAAGGGTTTATAGCAGTCAGAATCCTTGGGAGGATTAC TTCAAAGAGTATCCTTACAACCTTGATACGTGATGTGTCAGCTGAGACAGATAAAAAAACCTATGGTACCTGA
Upstream 100 bases:
>100_bases GATGATAGCCTGGTTGAAGCGGGTTATGTCGAGTGTGGATTAAAGTGTGCGACGAATAAATAGCAGGCGTAATGAGTATC GACCTCGGCATCCGGCCAGT
Downstream 100 bases:
>100_bases TACTGGCGACATTGAAGTCTATGATGTATGTGTGTTAGGCAAGGAGAATAGAGAATCAACACCCAACGGCAGCGCGCGTT ACGCGGAGTCAGAACATCTT
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MCLSGNPRNCVLFSVSLLLVLSSVILSGCFYSDTQTQTDSGEYLAGVVKVVAPENRVTRVKFSEKAIDPDGQESTYNSVS YAGKVQVVNFWYAACPPCREEAPILEEVWSEFKTQNVQFIGVNIRDNADVIKAFARKFKITFPSIIDVQNASVRLAFAGQ IPPNGVPVTYVLDKKGFIAVRILGRITSKSILTTLIRDVSAETDKKTYGT
Sequences:
>Translated_210_residues MCLSGNPRNCVLFSVSLLLVLSSVILSGCFYSDTQTQTDSGEYLAGVVKVVAPENRVTRVKFSEKAIDPDGQESTYNSVS YAGKVQVVNFWYAACPPCREEAPILEEVWSEFKTQNVQFIGVNIRDNADVIKAFARKFKITFPSIIDVQNASVRLAFAGQ IPPNGVPVTYVLDKKGFIAVRILGRITSKSILTTLIRDVSAETDKKTYGT >Mature_210_residues MCLSGNPRNCVLFSVSLLLVLSSVILSGCFYSDTQTQTDSGEYLAGVVKVVAPENRVTRVKFSEKAIDPDGQESTYNSVS YAGKVQVVNFWYAACPPCREEAPILEEVWSEFKTQNVQFIGVNIRDNADVIKAFARKFKITFPSIIDVQNASVRLAFAGQ IPPNGVPVTYVLDKKGFIAVRILGRITSKSILTTLIRDVSAETDKKTYGT
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 23100; Mature: 23100
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLSGNPRNCVLFSVSLLLVLSSVILSGCFYSDTQTQTDSGEYLAGVVKVVAPENRVTRV CCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEECCCCCEEEE KFSEKAIDPDGQESTYNSVSYAGKVQVVNFWYAACPPCREEAPILEEVWSEFKTQNVQFI EECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEE GVNIRDNADVIKAFARKFKITFPSIIDVQNASVRLAFAGQIPPNGVPVTYVLDKKGFIAV EEEECCCHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCCCCEEEEEECCCCEEEE RILGRITSKSILTTLIRDVSAETDKKTYGT EEEHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MCLSGNPRNCVLFSVSLLLVLSSVILSGCFYSDTQTQTDSGEYLAGVVKVVAPENRVTRV CCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEECCCCCEEEE KFSEKAIDPDGQESTYNSVSYAGKVQVVNFWYAACPPCREEAPILEEVWSEFKTQNVQFI EECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEE GVNIRDNADVIKAFARKFKITFPSIIDVQNASVRLAFAGQIPPNGVPVTYVLDKKGFIAV EEEECCCHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCCCCEEEEEECCCCEEEE RILGRITSKSILTTLIRDVSAETDKKTYGT EEEHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA