Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is resA [H]

Identifier: 28572909

GI number: 28572909

Start: 864901

End: 865533

Strand: Direct

Name: resA [H]

Synonym: TW768

Alternate gene names: 28572909

Gene position: 864901-865533 (Clockwise)

Preceding gene: 28572908

Following gene: 28572910

Centisome position: 93.41

GC content: 44.39

Gene sequence:

>633_bases
TTGTGTCTTTCGGGTAATCCCCGGAATTGTGTCCTGTTTTCTGTATCGCTTCTGTTGGTTCTTTCTTCGGTAATTTTGTC
TGGGTGTTTTTATTCCGACACACAGACCCAGACAGACTCTGGTGAATATCTTGCCGGGGTGGTAAAGGTTGTAGCCCCAG
AGAATCGTGTCACACGGGTTAAATTCTCCGAAAAGGCTATTGATCCAGATGGACAGGAGAGCACTTATAATTCCGTTTCA
TACGCAGGAAAGGTGCAAGTAGTAAATTTCTGGTATGCCGCATGCCCTCCGTGTCGTGAAGAGGCGCCAATTCTGGAGGA
GGTGTGGAGCGAATTCAAAACTCAAAATGTTCAGTTTATCGGCGTCAATATTCGTGATAATGCAGATGTCATAAAGGCAT
TTGCGAGAAAATTTAAAATCACTTTTCCATCAATCATAGATGTGCAAAACGCGTCTGTGCGGCTTGCATTTGCTGGGCAA
ATTCCCCCGAATGGGGTGCCAGTTACGTACGTGCTGGATAAAAAAGGGTTTATAGCAGTCAGAATCCTTGGGAGGATTAC
TTCAAAGAGTATCCTTACAACCTTGATACGTGATGTGTCAGCTGAGACAGATAAAAAAACCTATGGTACCTGA

Upstream 100 bases:

>100_bases
GATGATAGCCTGGTTGAAGCGGGTTATGTCGAGTGTGGATTAAAGTGTGCGACGAATAAATAGCAGGCGTAATGAGTATC
GACCTCGGCATCCGGCCAGT

Downstream 100 bases:

>100_bases
TACTGGCGACATTGAAGTCTATGATGTATGTGTGTTAGGCAAGGAGAATAGAGAATCAACACCCAACGGCAGCGCGCGTT
ACGCGGAGTCAGAACATCTT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MCLSGNPRNCVLFSVSLLLVLSSVILSGCFYSDTQTQTDSGEYLAGVVKVVAPENRVTRVKFSEKAIDPDGQESTYNSVS
YAGKVQVVNFWYAACPPCREEAPILEEVWSEFKTQNVQFIGVNIRDNADVIKAFARKFKITFPSIIDVQNASVRLAFAGQ
IPPNGVPVTYVLDKKGFIAVRILGRITSKSILTTLIRDVSAETDKKTYGT

Sequences:

>Translated_210_residues
MCLSGNPRNCVLFSVSLLLVLSSVILSGCFYSDTQTQTDSGEYLAGVVKVVAPENRVTRVKFSEKAIDPDGQESTYNSVS
YAGKVQVVNFWYAACPPCREEAPILEEVWSEFKTQNVQFIGVNIRDNADVIKAFARKFKITFPSIIDVQNASVRLAFAGQ
IPPNGVPVTYVLDKKGFIAVRILGRITSKSILTTLIRDVSAETDKKTYGT
>Mature_210_residues
MCLSGNPRNCVLFSVSLLLVLSSVILSGCFYSDTQTQTDSGEYLAGVVKVVAPENRVTRVKFSEKAIDPDGQESTYNSVS
YAGKVQVVNFWYAACPPCREEAPILEEVWSEFKTQNVQFIGVNIRDNADVIKAFARKFKITFPSIIDVQNASVRLAFAGQ
IPPNGVPVTYVLDKKGFIAVRILGRITSKSILTTLIRDVSAETDKKTYGT

Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 23100; Mature: 23100

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLSGNPRNCVLFSVSLLLVLSSVILSGCFYSDTQTQTDSGEYLAGVVKVVAPENRVTRV
CCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEECCCCCEEEE
KFSEKAIDPDGQESTYNSVSYAGKVQVVNFWYAACPPCREEAPILEEVWSEFKTQNVQFI
EECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEE
GVNIRDNADVIKAFARKFKITFPSIIDVQNASVRLAFAGQIPPNGVPVTYVLDKKGFIAV
EEEECCCHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCCCCEEEEEECCCCEEEE
RILGRITSKSILTTLIRDVSAETDKKTYGT
EEEHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MCLSGNPRNCVLFSVSLLLVLSSVILSGCFYSDTQTQTDSGEYLAGVVKVVAPENRVTRV
CCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHEECCCCCEEEE
KFSEKAIDPDGQESTYNSVSYAGKVQVVNFWYAACPPCREEAPILEEVWSEFKTQNVQFI
EECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEE
GVNIRDNADVIKAFARKFKITFPSIIDVQNASVRLAFAGQIPPNGVPVTYVLDKKGFIAV
EEEECCCHHHHHHHHHHHCCCCCCEEEECCCEEEEEEECCCCCCCCEEEEEECCCCEEEE
RILGRITSKSILTTLIRDVSAETDKKTYGT
EEEHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA