| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is 28572908
Identifier: 28572908
GI number: 28572908
Start: 864255
End: 864863
Strand: Direct
Name: 28572908
Synonym: TW767
Alternate gene names: NA
Gene position: 864255-864863 (Clockwise)
Preceding gene: 28572906
Following gene: 28572909
Centisome position: 93.34
GC content: 46.47
Gene sequence:
>609_bases GTGACCATGATTCACTTAGTCCGCCACGCGCAAGTAAACAATCCAACCGGCATTCTGTACGGGAGGCTCCCTAACTATCG CATAACCGAATCTGGTGAATGTGACGCGAGAAGGGTTGCCGATTTTTTTTCTTCACGGAAGGTATCTGCGCTCTACGCAT CTCCGCTCCTGAGAACTCAATTGTCTGCAAAACCTATTTCAGAGGCTTTGAATCTGGAGATAAAAACGGACAATAGATTG ATTGAGCCGTATAGCTATTTTGAGGGCAAAATCGTCAGTGGTTCAAACAGTGCTCTTCGGTCACCACGCTATTGGCACTT ATTACGAAATCCTGTCCGTCCGAGCTGGGGTGAGCCTTACGAGAGTATTCTGTCAAGAATGCTCTCAATTATCTCCGAGG CAAAGGATAGCGAGCATGATGTTGTAATGGTCACCCATCAGCTTCCCATTTGGATAGTGCATTTGCATCAACTTGCAAAG CCGTTATTCCACAATCCGAAGACCCGCAGATGCACAGTTTCCAGTATCACTAGCTTCGAGTATAGAGATGATAGCCTGGT TGAAGCGGGTTATGTCGAGTGTGGATTAAAGTGTGCGACGAATAAATAG
Upstream 100 bases:
>100_bases GATAAATGAGCAATCAAAACACTTGGCATCTCTGAAGACCAACTCGAATTTACTATCTCTCTGTCACACACCTACGAAAT ACTACCCTAGACTTGTATAA
Downstream 100 bases:
>100_bases CAGGCGTAATGAGTATCGACCTCGGCATCCGGCCAGTTTGTGTCTTTCGGGTAATCCCCGGAATTGTGTCCTGTTTTCTG TATCGCTTCTGTTGGTTCTT
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTMIHLVRHAQVNNPTGILYGRLPNYRITESGECDARRVADFFSSRKVSALYASPLLRTQLSAKPISEALNLEIKTDNRL IEPYSYFEGKIVSGSNSALRSPRYWHLLRNPVRPSWGEPYESILSRMLSIISEAKDSEHDVVMVTHQLPIWIVHLHQLAK PLFHNPKTRRCTVSSITSFEYRDDSLVEAGYVECGLKCATNK
Sequences:
>Translated_202_residues MTMIHLVRHAQVNNPTGILYGRLPNYRITESGECDARRVADFFSSRKVSALYASPLLRTQLSAKPISEALNLEIKTDNRL IEPYSYFEGKIVSGSNSALRSPRYWHLLRNPVRPSWGEPYESILSRMLSIISEAKDSEHDVVMVTHQLPIWIVHLHQLAK PLFHNPKTRRCTVSSITSFEYRDDSLVEAGYVECGLKCATNK >Mature_201_residues TMIHLVRHAQVNNPTGILYGRLPNYRITESGECDARRVADFFSSRKVSALYASPLLRTQLSAKPISEALNLEIKTDNRLI EPYSYFEGKIVSGSNSALRSPRYWHLLRNPVRPSWGEPYESILSRMLSIISEAKDSEHDVVMVTHQLPIWIVHLHQLAKP LFHNPKTRRCTVSSITSFEYRDDSLVEAGYVECGLKCATNK
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: NA
Molecular weight: Translated: 23030; Mature: 22898
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMIHLVRHAQVNNPTGILYGRLPNYRITESGECDARRVADFFSSRKVSALYASPLLRTQ CHHHHEEHHHCCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH LSAKPISEALNLEIKTDNRLIEPYSYFEGKIVSGSNSALRSPRYWHLLRNPVRPSWGEPY HCCCCHHHHHEEEECCCCCEECCHHHCCCEEECCCCHHHCCCHHHHHHCCCCCCCCCCCH ESILSRMLSIISEAKDSEHDVVMVTHQLPIWIVHLHQLAKPLFHNPKTRRCTVSSITSFE HHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEHHHCEECC YRDDSLVEAGYVECGLKCATNK CCCCCHHHCCHHHCCCEECCCC >Mature Secondary Structure TMIHLVRHAQVNNPTGILYGRLPNYRITESGECDARRVADFFSSRKVSALYASPLLRTQ HHHHEEHHHCCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH LSAKPISEALNLEIKTDNRLIEPYSYFEGKIVSGSNSALRSPRYWHLLRNPVRPSWGEPY HCCCCHHHHHEEEECCCCCEECCHHHCCCEEECCCCHHHCCCHHHHHHCCCCCCCCCCCH ESILSRMLSIISEAKDSEHDVVMVTHQLPIWIVHLHQLAKPLFHNPKTRRCTVSSITSFE HHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEHHHCEECC YRDDSLVEAGYVECGLKCATNK CCCCCHHHCCHHHCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]