Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572908

Identifier: 28572908

GI number: 28572908

Start: 864255

End: 864863

Strand: Direct

Name: 28572908

Synonym: TW767

Alternate gene names: NA

Gene position: 864255-864863 (Clockwise)

Preceding gene: 28572906

Following gene: 28572909

Centisome position: 93.34

GC content: 46.47

Gene sequence:

>609_bases
GTGACCATGATTCACTTAGTCCGCCACGCGCAAGTAAACAATCCAACCGGCATTCTGTACGGGAGGCTCCCTAACTATCG
CATAACCGAATCTGGTGAATGTGACGCGAGAAGGGTTGCCGATTTTTTTTCTTCACGGAAGGTATCTGCGCTCTACGCAT
CTCCGCTCCTGAGAACTCAATTGTCTGCAAAACCTATTTCAGAGGCTTTGAATCTGGAGATAAAAACGGACAATAGATTG
ATTGAGCCGTATAGCTATTTTGAGGGCAAAATCGTCAGTGGTTCAAACAGTGCTCTTCGGTCACCACGCTATTGGCACTT
ATTACGAAATCCTGTCCGTCCGAGCTGGGGTGAGCCTTACGAGAGTATTCTGTCAAGAATGCTCTCAATTATCTCCGAGG
CAAAGGATAGCGAGCATGATGTTGTAATGGTCACCCATCAGCTTCCCATTTGGATAGTGCATTTGCATCAACTTGCAAAG
CCGTTATTCCACAATCCGAAGACCCGCAGATGCACAGTTTCCAGTATCACTAGCTTCGAGTATAGAGATGATAGCCTGGT
TGAAGCGGGTTATGTCGAGTGTGGATTAAAGTGTGCGACGAATAAATAG

Upstream 100 bases:

>100_bases
GATAAATGAGCAATCAAAACACTTGGCATCTCTGAAGACCAACTCGAATTTACTATCTCTCTGTCACACACCTACGAAAT
ACTACCCTAGACTTGTATAA

Downstream 100 bases:

>100_bases
CAGGCGTAATGAGTATCGACCTCGGCATCCGGCCAGTTTGTGTCTTTCGGGTAATCCCCGGAATTGTGTCCTGTTTTCTG
TATCGCTTCTGTTGGTTCTT

Product: phosphoglycerate mutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTMIHLVRHAQVNNPTGILYGRLPNYRITESGECDARRVADFFSSRKVSALYASPLLRTQLSAKPISEALNLEIKTDNRL
IEPYSYFEGKIVSGSNSALRSPRYWHLLRNPVRPSWGEPYESILSRMLSIISEAKDSEHDVVMVTHQLPIWIVHLHQLAK
PLFHNPKTRRCTVSSITSFEYRDDSLVEAGYVECGLKCATNK

Sequences:

>Translated_202_residues
MTMIHLVRHAQVNNPTGILYGRLPNYRITESGECDARRVADFFSSRKVSALYASPLLRTQLSAKPISEALNLEIKTDNRL
IEPYSYFEGKIVSGSNSALRSPRYWHLLRNPVRPSWGEPYESILSRMLSIISEAKDSEHDVVMVTHQLPIWIVHLHQLAK
PLFHNPKTRRCTVSSITSFEYRDDSLVEAGYVECGLKCATNK
>Mature_201_residues
TMIHLVRHAQVNNPTGILYGRLPNYRITESGECDARRVADFFSSRKVSALYASPLLRTQLSAKPISEALNLEIKTDNRLI
EPYSYFEGKIVSGSNSALRSPRYWHLLRNPVRPSWGEPYESILSRMLSIISEAKDSEHDVVMVTHQLPIWIVHLHQLAKP
LFHNPKTRRCTVSSITSFEYRDDSLVEAGYVECGLKCATNK

Specific function: Unknown

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: NA

Molecular weight: Translated: 23030; Mature: 22898

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMIHLVRHAQVNNPTGILYGRLPNYRITESGECDARRVADFFSSRKVSALYASPLLRTQ
CHHHHEEHHHCCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
LSAKPISEALNLEIKTDNRLIEPYSYFEGKIVSGSNSALRSPRYWHLLRNPVRPSWGEPY
HCCCCHHHHHEEEECCCCCEECCHHHCCCEEECCCCHHHCCCHHHHHHCCCCCCCCCCCH
ESILSRMLSIISEAKDSEHDVVMVTHQLPIWIVHLHQLAKPLFHNPKTRRCTVSSITSFE
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEHHHCEECC
YRDDSLVEAGYVECGLKCATNK
CCCCCHHHCCHHHCCCEECCCC
>Mature Secondary Structure 
TMIHLVRHAQVNNPTGILYGRLPNYRITESGECDARRVADFFSSRKVSALYASPLLRTQ
HHHHEEHHHCCCCCCEEEEECCCCCEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
LSAKPISEALNLEIKTDNRLIEPYSYFEGKIVSGSNSALRSPRYWHLLRNPVRPSWGEPY
HCCCCHHHHHEEEECCCCCEECCHHHCCCEEECCCCHHHCCCHHHHHHCCCCCCCCCCCH
ESILSRMLSIISEAKDSEHDVVMVTHQLPIWIVHLHQLAKPLFHNPKTRRCTVSSITSFE
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEHHHCEECC
YRDDSLVEAGYVECGLKCATNK
CCCCCHHHCCHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]