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The map label for this gene is tadA [H]

Identifier: 28572904

GI number: 28572904

Start: 860629

End: 861141

Strand: Direct

Name: tadA [H]

Synonym: TW763

Alternate gene names: 28572904

Gene position: 860629-861141 (Clockwise)

Preceding gene: 28572897

Following gene: 28572905

Centisome position: 92.95

GC content: 44.83

Gene sequence:

>513_bases
GTGGAACATACGGTGAAGATAACAGGGGAACATAAAGATCTTTATAGAGGCTCTTTTCGTGACACACCCGACGAAAAAAT
AATGCGCAAGGCCCTCTGTCTTGCACATGCCGCTGGTGAAAAGGGCGAAATCCCAGTTGGGGCGGTGATTGCCGATGTGA
ACGGCAAAACAATAGCTGAAGGATTCAACAAAAGGGAGGAAAGCAAGGACCCAACCGATCACGCGGAGATAATTGCTATA
AGAAAAGCGAGCCAAATGCTTAAAGACTGGAGATTGTCCGGGCTAACGCTATTCGTAACTATGGAGCCATGCACGATGTG
TGCTGGGGCCATTGTTACGTCGCGAATTAGTAGAGTCGTTTTTGGGGCATTCAATAACAAAACAGGTTCAGTCGGTAGCA
GGATTGACATTCTGAGAGATGAGATATTAAACACAAATATTGAGGTTGTATCAGGGGTTCTTATTTCAGAGTGTGAAGGT
GTTTTGGCAAAGTTTTTTGCAGATTTGAGATAG

Upstream 100 bases:

>100_bases
ATTATTACATCTTGAGTCATTACATGTCAAGTTTTAGTAGATATTTTTTAGAGCTTACAATAGCCTATTCTTTTTCAAGA
ATGAGGTCGTAAAGCTTTCT

Downstream 100 bases:

>100_bases
GTGCTTCCCTTAGGTTTGGAGGGCTGATCTTGTTGAGAATGACCCTAAGGCGTTTATCCATGGAAAACCGAACTTAGGCA
TAATCTGATACAGCTCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MEHTVKITGEHKDLYRGSFRDTPDEKIMRKALCLAHAAGEKGEIPVGAVIADVNGKTIAEGFNKREESKDPTDHAEIIAI
RKASQMLKDWRLSGLTLFVTMEPCTMCAGAIVTSRISRVVFGAFNNKTGSVGSRIDILRDEILNTNIEVVSGVLISECEG
VLAKFFADLR

Sequences:

>Translated_170_residues
MEHTVKITGEHKDLYRGSFRDTPDEKIMRKALCLAHAAGEKGEIPVGAVIADVNGKTIAEGFNKREESKDPTDHAEIIAI
RKASQMLKDWRLSGLTLFVTMEPCTMCAGAIVTSRISRVVFGAFNNKTGSVGSRIDILRDEILNTNIEVVSGVLISECEG
VLAKFFADLR
>Mature_170_residues
MEHTVKITGEHKDLYRGSFRDTPDEKIMRKALCLAHAAGEKGEIPVGAVIADVNGKTIAEGFNKREESKDPTDHAEIIAI
RKASQMLKDWRLSGLTLFVTMEPCTMCAGAIVTSRISRVVFGAFNNKTGSVGSRIDILRDEILNTNIEVVSGVLISECEG
VLAKFFADLR

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=154, Percent_Identity=34.4155844155844, Blast_Score=80, Evalue=1e-15,
Organism=Escherichia coli, GI145693172, Length=142, Percent_Identity=47.1830985915493, Blast_Score=140, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI17541138, Length=152, Percent_Identity=33.5526315789474, Blast_Score=83, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17555996, Length=100, Percent_Identity=38, Blast_Score=77, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17554608, Length=108, Percent_Identity=37.962962962963, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322425, Length=153, Percent_Identity=31.3725490196078, Blast_Score=65, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21355527, Length=147, Percent_Identity=31.9727891156463, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 18623; Mature: 18623

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHTVKITGEHKDLYRGSFRDTPDEKIMRKALCLAHAAGEKGEIPVGAVIADVNGKTIAE
CCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHH
GFNKREESKDPTDHAEIIAIRKASQMLKDWRLSGLTLFVTMEPCTMCAGAIVTSRISRVV
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHH
FGAFNNKTGSVGSRIDILRDEILNTNIEVVSGVLISECEGVLAKFFADLR
HHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEHTVKITGEHKDLYRGSFRDTPDEKIMRKALCLAHAAGEKGEIPVGAVIADVNGKTIAE
CCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHH
GFNKREESKDPTDHAEIIAIRKASQMLKDWRLSGLTLFVTMEPCTMCAGAIVTSRISRVV
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHH
FGAFNNKTGSVGSRIDILRDEILNTNIEVVSGVLISECEGVLAKFFADLR
HHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]