Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572864

Identifier: 28572864

GI number: 28572864

Start: 817873

End: 818757

Strand: Direct

Name: 28572864

Synonym: TW723

Alternate gene names: NA

Gene position: 817873-818757 (Clockwise)

Preceding gene: 28572863

Following gene: 28572874

Centisome position: 88.33

GC content: 47.57

Gene sequence:

>885_bases
ATGGGATACAAGAAGATAGTTTTGAAGGCAGCTACCCTGGGGCTGGGTGCTGCGGGAATATGGGCTATTTGTTTCGAGCG
GAATCTGTTTACTCTTCGGCATTTTAGAATTCCGGTTCTGAAAAAGGGTAGTAAGCCCATTCGCATACTGCACCTGTCTG
ATATTCATATCACATCATGTCAGGGGGGTAAGAAAAATTGGCTTCAGTCCCTTGCGCAGCTCAAGCCTGATTTTATTATC
AATACAGGTGATAACTTGGGTCATGCACAAGGCTTTGGGATATTTTGCGACTCAATGCGCAGTTTCTGCGGAATACCGGG
AGCCTTTGTCAATGGATCAAACGACTATTTCGAGCCGTATTTTAAGAATCCATTTGCCTATCTGTTTGGACACAGTAAGA
CTAAGGCATCTGCCAAGGCACTTGATACGGATAGACTGCGCGGGTTCTTGACAGGCGAGATGAAATGGATAGATCTAAAT
AATCGGCAATCACACATCAGGATAAACGGTTCCGTGATAAAGCTCATTGGAGTTGATGATCCGCACTGTGGTTACGACAA
ACTTGAGGAAGTGCTGCCGGTAAGAGGCAGCTCTGATGTTGTACTCGGGCTTACGCACGCACCATACAGAAGGGTGCTTG
ACGCGTACGCAAAGTCGGGTGTTCATGTTATTTTTGCCGGTCATACACACGGCGGGCAGGTAAACCTGTTTGGGGCACTA
ACTACAAATTGTGACTTACCCAGATTCCAGGCAAAGGGCCTGAGCGGATGGCATTCTGAAACGAGCACCTCGTGGCTGCA
CGTTTCCGCTGGTGTTGGAACATCGGTTTACGCCCCGTTTCGGTTTGCATGTAAACCTGAAGCGTCATTGATAGAGCTTG
TTTAG

Upstream 100 bases:

>100_bases
TACCTGTGCTATTTGTGTTGTTCGGGCAAGATTTCAGGGTTTATAGGATGCTTGTGTGCCGTAAGTATCCGCAGACTAAA
ATAGTCAATGAAATTATGCA

Downstream 100 bases:

>100_bases
TATCAAACGGCCATATGGCTTACTTTATCGTCTAAATACAGAGGTCTGATATCCCGGAATTGCCGCCTTGCCCAGTTATT
TACCCAGTATTGACTCATTT

Product: secreted protein

Products: NA

Alternate protein names: Secreted Protein; Phosphohydrolase; Ser/Thr Protein Phosphatase; Calcineurin-Like Phosphoesterase; Secreted Phosphoesterase Protein; Ser/Thr Protein Phosphatase Family Protein; Hydrolase; Phosphoesterase; Signal Peptide; Metallophosphoesterase Domain-Containing Protein; Phosphohydrolases

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MGYKKIVLKAATLGLGAAGIWAICFERNLFTLRHFRIPVLKKGSKPIRILHLSDIHITSCQGGKKNWLQSLAQLKPDFII
NTGDNLGHAQGFGIFCDSMRSFCGIPGAFVNGSNDYFEPYFKNPFAYLFGHSKTKASAKALDTDRLRGFLTGEMKWIDLN
NRQSHIRINGSVIKLIGVDDPHCGYDKLEEVLPVRGSSDVVLGLTHAPYRRVLDAYAKSGVHVIFAGHTHGGQVNLFGAL
TTNCDLPRFQAKGLSGWHSETSTSWLHVSAGVGTSVYAPFRFACKPEASLIELV

Sequences:

>Translated_294_residues
MGYKKIVLKAATLGLGAAGIWAICFERNLFTLRHFRIPVLKKGSKPIRILHLSDIHITSCQGGKKNWLQSLAQLKPDFII
NTGDNLGHAQGFGIFCDSMRSFCGIPGAFVNGSNDYFEPYFKNPFAYLFGHSKTKASAKALDTDRLRGFLTGEMKWIDLN
NRQSHIRINGSVIKLIGVDDPHCGYDKLEEVLPVRGSSDVVLGLTHAPYRRVLDAYAKSGVHVIFAGHTHGGQVNLFGAL
TTNCDLPRFQAKGLSGWHSETSTSWLHVSAGVGTSVYAPFRFACKPEASLIELV
>Mature_293_residues
GYKKIVLKAATLGLGAAGIWAICFERNLFTLRHFRIPVLKKGSKPIRILHLSDIHITSCQGGKKNWLQSLAQLKPDFIIN
TGDNLGHAQGFGIFCDSMRSFCGIPGAFVNGSNDYFEPYFKNPFAYLFGHSKTKASAKALDTDRLRGFLTGEMKWIDLNN
RQSHIRINGSVIKLIGVDDPHCGYDKLEEVLPVRGSSDVVLGLTHAPYRRVLDAYAKSGVHVIFAGHTHGGQVNLFGALT
TNCDLPRFQAKGLSGWHSETSTSWLHVSAGVGTSVYAPFRFACKPEASLIELV

Specific function: Unknown

COG id: COG1408

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32307; Mature: 32175

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYKKIVLKAATLGLGAAGIWAICFERNLFTLRHFRIPVLKKGSKPIRILHLSDIHITSC
CCHHHEEEEEHHCCCCCHHHEEEEECCCEEEEEEEECCCEECCCCCEEEEEECCEEEECC
QGGKKNWLQSLAQLKPDFIINTGDNLGHAQGFGIFCDSMRSFCGIPGAFVNGSNDYFEPY
CCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCHH
FKNPFAYLFGHSKTKASAKALDTDRLRGFLTGEMKWIDLNNRQSHIRINGSVIKLIGVDD
HCCCEEEEECCCCCCCHHHHCCHHHHCEEEECCEEEEEECCCCCEEEECCCEEEEEECCC
PHCGYDKLEEVLPVRGSSDVVLGLTHAPYRRVLDAYAKSGVHVIFAGHTHGGQVNLFGAL
CCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEE
TTNCDLPRFQAKGLSGWHSETSTSWLHVSAGVGTSVYAPFRFACKPEASLIELV
ECCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCEEECCEEEECCCCCCEEECC
>Mature Secondary Structure 
GYKKIVLKAATLGLGAAGIWAICFERNLFTLRHFRIPVLKKGSKPIRILHLSDIHITSC
CHHHEEEEEHHCCCCCHHHEEEEECCCEEEEEEEECCCEECCCCCEEEEEECCEEEECC
QGGKKNWLQSLAQLKPDFIINTGDNLGHAQGFGIFCDSMRSFCGIPGAFVNGSNDYFEPY
CCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCHH
FKNPFAYLFGHSKTKASAKALDTDRLRGFLTGEMKWIDLNNRQSHIRINGSVIKLIGVDD
HCCCEEEEECCCCCCCHHHHCCHHHHCEEEECCEEEEEECCCCCEEEECCCEEEEEECCC
PHCGYDKLEEVLPVRGSSDVVLGLTHAPYRRVLDAYAKSGVHVIFAGHTHGGQVNLFGAL
CCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEE
TTNCDLPRFQAKGLSGWHSETSTSWLHVSAGVGTSVYAPFRFACKPEASLIELV
ECCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCEEECCEEEECCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA