| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is znuB [C]
Identifier: 28572828
GI number: 28572828
Start: 775284
End: 776138
Strand: Direct
Name: znuB [C]
Synonym: TW687
Alternate gene names: 28572828
Gene position: 775284-776138 (Clockwise)
Preceding gene: 28572827
Following gene: 28572829
Centisome position: 83.73
GC content: 45.26
Gene sequence:
>855_bases GTGATTGATTATCTACTTGCTCCTTTCGAGTACGGGTTCATGCTGCGTGCCTTTATTGTTGTCATTGTGTCAGCAACCCT GTGCGGCCTCATATCGTGTTGGGTGGTTCTTCTTGGCTGGTCGATGCTCGGTGAGGCAATTTCACACGCGATATTTCCCG GAGTTGTCCTAAGCTTCCTCCTTGGCGTGCCATTTGCCATTGGCGCTTTTGTATCCGGCCTTGTGGCAGTGTATCTAATC GGCCACCTGAGAAGTAACCCTAGGATCAAAGAGGATGCTGCGATGGGTGTTGTGTTCATAACCATGTTCTCGCTTGGCCT AATCTTAGTTTTCTTTATTCCAGGCAAAGGTCATCTTATGCATATATTGTTCGGCAACTTGCTAAGTGTTACATATCTGG ATCTGTATCAGGTAATAATCCTTGGTGTGCTTGGGATATCGATCCTAACTTATAGGCGAAGGGATTTTACCCTGTACGCA TTCGACCCCGGACACGCGAATGTCATTGGTATATCCACCAGATCACTTCACAATATATTTCTTATAACCCTAGCGTTCAC AATTGTTGTCTCGGTACAGCAAGTCGGTGTGGTTCTTGTTGTTGCTATGTTGGTCATACCGGGCGTCTCGGCAAGTCTGC TTAGCAGAAAAATATCAAGAATGTTTATCATATCTCCCGTCATGGCTGTTACAACTTCTGTAGCTGGTGTTTACATAAGC TACACATTTGACTTACCACCGGGATCGGTGATTGTCTTGGTTATGGGATCAGTGTTCGTTCTCACATACACTGTAACGAG TATCATGTCAATGATTGTGAGCAATAGAACTCTGTTGAGGACAAGACACGGGTAA
Upstream 100 bases:
>100_bases TCGCGGATGGTAGCAACTGACGGGATGTGTTGCGCTGTTGTGACCCTGTTGCGTGCGATATGCCCGTCCCGTGTCTCTCT GACCTTTCGGCGGGGTATCT
Downstream 100 bases:
>100_bases CACTGGTGTTCTAGTATTTATGGATTGCGTCATGCAATGAGGTTTGCTATGCTTATCACCGGTTATTTAAGAGGGAATGG GGTGATTAGTTAAATTGATG
Product: ABC transporter integral membrane subunit
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MIDYLLAPFEYGFMLRAFIVVIVSATLCGLISCWVVLLGWSMLGEAISHAIFPGVVLSFLLGVPFAIGAFVSGLVAVYLI GHLRSNPRIKEDAAMGVVFITMFSLGLILVFFIPGKGHLMHILFGNLLSVTYLDLYQVIILGVLGISILTYRRRDFTLYA FDPGHANVIGISTRSLHNIFLITLAFTIVVSVQQVGVVLVVAMLVIPGVSASLLSRKISRMFIISPVMAVTTSVAGVYIS YTFDLPPGSVIVLVMGSVFVLTYTVTSIMSMIVSNRTLLRTRHG
Sequences:
>Translated_284_residues MIDYLLAPFEYGFMLRAFIVVIVSATLCGLISCWVVLLGWSMLGEAISHAIFPGVVLSFLLGVPFAIGAFVSGLVAVYLI GHLRSNPRIKEDAAMGVVFITMFSLGLILVFFIPGKGHLMHILFGNLLSVTYLDLYQVIILGVLGISILTYRRRDFTLYA FDPGHANVIGISTRSLHNIFLITLAFTIVVSVQQVGVVLVVAMLVIPGVSASLLSRKISRMFIISPVMAVTTSVAGVYIS YTFDLPPGSVIVLVMGSVFVLTYTVTSIMSMIVSNRTLLRTRHG >Mature_284_residues MIDYLLAPFEYGFMLRAFIVVIVSATLCGLISCWVVLLGWSMLGEAISHAIFPGVVLSFLLGVPFAIGAFVSGLVAVYLI GHLRSNPRIKEDAAMGVVFITMFSLGLILVFFIPGKGHLMHILFGNLLSVTYLDLYQVIILGVLGISILTYRRRDFTLYA FDPGHANVIGISTRSLHNIFLITLAFTIVVSVQQVGVVLVVAMLVIPGVSASLLSRKISRMFIISPVMAVTTSVAGVYIS YTFDLPPGSVIVLVMGSVFVLTYTVTSIMSMIVSNRTLLRTRHG
Specific function: Part of an ATP-driven transport system HI_0359/HI_0360/HI_0361/HI_0362 for iron (Potential) [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=264, Percent_Identity=28.4090909090909, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 30869; Mature: 30869
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDYLLAPFEYGFMLRAFIVVIVSATLCGLISCWVVLLGWSMLGEAISHAIFPGVVLSFL CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVPFAIGAFVSGLVAVYLIGHLRSNPRIKEDAAMGVVFITMFSLGLILVFFIPGKGHLM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCH HILFGNLLSVTYLDLYQVIILGVLGISILTYRRRDFTLYAFDPGHANVIGISTRSLHNIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCEEEECHHHHHHHH LITLAFTIVVSVQQVGVVLVVAMLVIPGVSASLLSRKISRMFIISPVMAVTTSVAGVYIS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE YTFDLPPGSVIVLVMGSVFVLTYTVTSIMSMIVSNRTLLRTRHG EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure MIDYLLAPFEYGFMLRAFIVVIVSATLCGLISCWVVLLGWSMLGEAISHAIFPGVVLSFL CCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGVPFAIGAFVSGLVAVYLIGHLRSNPRIKEDAAMGVVFITMFSLGLILVFFIPGKGHLM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCH HILFGNLLSVTYLDLYQVIILGVLGISILTYRRRDFTLYAFDPGHANVIGISTRSLHNIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEECCCCCCEEEECHHHHHHHH LITLAFTIVVSVQQVGVVLVVAMLVIPGVSASLLSRKISRMFIISPVMAVTTSVAGVYIS HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEE YTFDLPPGSVIVLVMGSVFVLTYTVTSIMSMIVSNRTLLRTRHG EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]