| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
Click here to switch to the map view.
The map label for this gene is 28572821
Identifier: 28572821
GI number: 28572821
Start: 769353
End: 769517
Strand: Reverse
Name: 28572821
Synonym: TW680
Alternate gene names: NA
Gene position: 769517-769353 (Counterclockwise)
Preceding gene: 28572822
Following gene: 28572820
Centisome position: 83.11
GC content: 44.85
Gene sequence:
>165_bases GTGGACTGGCTTGACCAATCAATGCTTTGCATTTGGTGTACATTAGACCGTGTGAACGGCATGTCGCTTGTATCCCTTGA AATGCTGTGTGTGGGCATCCTGGTACTTATTACTCTTGCCATTGCATATGCTGCCATTTCTGTCTTGGTAAGACTCTTTA GGTAA
Upstream 100 bases:
>100_bases GACCATTGGCCTTTGGTAGTTGCATTATTTACTTTGCATCTGTTCTGATCTTCGGCGTCTTTCTATAACAATTGTTGTCG AATTATTCCGTACTGTTGTG
Downstream 100 bases:
>100_bases AAGGTCGATGTTTAGCTGACTCTTGATGTTCTTGAATCTGGATACAGCAGTTCCGTTTCGGATTGCACGGAGAGTATTGG CTGTTACCCTTGTTGCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MDWLDQSMLCIWCTLDRVNGMSLVSLEMLCVGILVLITLAIAYAAISVLVRLFR
Sequences:
>Translated_54_residues MDWLDQSMLCIWCTLDRVNGMSLVSLEMLCVGILVLITLAIAYAAISVLVRLFR >Mature_54_residues MDWLDQSMLCIWCTLDRVNGMSLVSLEMLCVGILVLITLAIAYAAISVLVRLFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6075; Mature: 6075
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.6 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 13.0 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 13.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWLDQSMLCIWCTLDRVNGMSLVSLEMLCVGILVLITLAIAYAAISVLVRLFR CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDWLDQSMLCIWCTLDRVNGMSLVSLEMLCVGILVLITLAIAYAAISVLVRLFR CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA