| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
Click here to switch to the map view.
The map label for this gene is ftsK
Identifier: 28572777
GI number: 28572777
Start: 717893
End: 720118
Strand: Reverse
Name: ftsK
Synonym: TW631
Alternate gene names: 28572777
Gene position: 720118-717893 (Counterclockwise)
Preceding gene: 28572778
Following gene: 28572776
Centisome position: 77.77
GC content: 44.74
Gene sequence:
>2226_bases TTGAGTGCAAAGAAGTCGTATCTGAAAGTATGGCGCGGCCTTGCCGGGGCAGCAGGGTCTTGTGCCAGAGTGTTTTCAAA GAAATCACTTGCCCGTAGGGATCGAAGGGATCAGTTGCCCTTTGCCCTGTTTTTATTCGGCTTAGTCGGTGCTGTCTTTC AGTGGTTTTTGTATGGTAACTGGCTTTCTGGCATTGTTTCTGAATATACCGTTGCTGCATTTTTTGGCGGCTTTTCAATC GTTCTTCCGATTTTGCTAATCGGGTTTTCAATTTGGCTTTTTCGTAATCCGCAAAAAACGCATGACAATATCCGTGTATC TATTGGTCTATTTATGTTTTCAAGCTTTTCGGCAGCATTTTTACATTTTTCTGCTGGATTTCCTTATCCATCTTCTGGAA TCCGGATTTTATCTACCGCGGGTGGGATTATTGGGTGGCTTGTAGGTTTACCACTTACTACATTGCCTAGCTACCTAGCT AAGACTGTCTGCATTATATTTATTGTTCTCTCAGTGTCTGTTATTAGCAAAACACCAATATCAAAGATAGTGCGAGTTAT TTTTAGATATGCAAAATGGCTTTTCAATTCCGACAGTGTAAAAACTTCCCCAAATAGCTCAGTCAGTTCATCGAGTGAGC ACCAAGAATTAACTGGCAGGGATATGCCTGATACCGCAGGCGACAATAGGCATGATGAAACAGTAACCGTGTTGAGCGGA ACCTCATTGACCGGCTCACCCGTATCTGAATATCGTGGTGAATCTTCAGATTATGCGCTTCCGAGTTTGGATATCCTCAA TTCCTATCCTCCGGTCAAGCATGATGATGCAGAAAATGAGAAGGTGATTACGGCACTATCCGGCGTTCTTAGGCAATTTA GCGTCAACGCGCGATTCTCGGGGTTTTCGAGGGGCCCGACAGTTACGCAGTACGAATTAGAACTCGGTGAAGGTGTAAAA GTTGAACGGATTATTGCCCTTACAAAAAACATATCCTATGCTGTTGCATCAGACAAGGTAAGTATTCTTTCCCCTATTCC AGGAAAAAGTGCAATTGGCATTGAAATACCTAATAAAAAGAGAGAACTTGTTGCCCTGGGTTCTGTTTTGCAGTCTATTC ATCCAGATGCACATCCAATGACGGTTGGGCTTGGAAAAGATTCAAGCGGAGGTTTTGTTCTAACCAACCTCACCACTATG CCACACCTACTTGTTGCCGGTGCGACCGGTTCTGGGAAATCTAGTTTTGTTAACTCCATGATCACGAGCATTCTGCTTCG GGCCCATCCAAGTCAAGTGCGTTTGGTATTAATTGATCCAAAACGCGTCGAGCTTGCGATTTATTCTGGTGTTCCGCATC TTATAACTCCGATTGTCACAGACCCGAAAAAGGCGTCTGAGGTTTTGCAATGGGTTGTAAAGGAAATGGAAAGGCGATAC GATGACCTGGCAAGTTTCGGTTTTAGGCATATAGATGACTTTAATCTTGCAGTGCGTGCCAAAAAGATTGCATCCGACTC GAGAGAGCTAACGCCTTATCCGTATCTTCTGGTAATAGTTGATGAGCTGGCCGACCTTATGCTGGTTGCCGCAAAGGATG TCGAAGAATCGATAGTACGTATTACCCAGCTTGCGCGTGCCAGTGGAATTCATATTGTTTTGGCAACACAGAGACCAAGT GTAAATGTTGTAACAGGCCTTATAAAGGCAAATGTCCCGAGTCGCTTAGCATTTGCCGTATCAAGTTTGGTGGATTCGCG AGTTATACTCGACCGTCCGGGTGCTGAAAAACTGGTTGGTCAGGGTGATGGCTTATTTTTACCAATTAGCGCCGGTAAGC CTATTAGGATCCAGTCATCCTGGGTAACGGAAAATGAGATTTTAAGGGTAGTTGAATACGTAAAATCGCAGGCTCACCCC GACTATTATGTGCTTGAGGTGCAGAATCAGGGCAATATAGACTCGCATATAGGTGATGATATGCCTTTGTTATTGAAGGC TACAGAGCTGGTTATAAACTCACAGCTCGGGTCAACATCAATGTTGCAAAGAAAGCTTCGAGTCGGATTTGCTAAGGCTG GCAGGCTAATGGACCTTATGGAGAGTATGGGAATCGTTGGTCCGGGTCAGGGCTCGAAGGCCCGGGAAGTTTTGGTTACC CCTCAGGATCTTGATTCGACATTGGCGAGAATATCAGCTTCTGTAAGTGACTCTAAACTCGATTAG
Upstream 100 bases:
>100_bases ATGAACATGATCTCACACGGATTGTTAGGCGTGTTGTTGGTTCATGGGCTGGCCGTAAGATACGAAGGCATCCGGTTATC GTTCCTCTGGTTGTTACTGT
Downstream 100 bases:
>100_bases AGTGCAAGGCATTTCCTGTTTGCATTTCCTGTTTTACTGAATGCGCTGAGTTACAACTTGACCTGTGGACTTATTACGCT CCTGCCAAGCCTGCGGCCCC
Product: FtsK/SpoIIIE homologue
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 741; Mature: 740
Protein sequence:
>741_residues MSAKKSYLKVWRGLAGAAGSCARVFSKKSLARRDRRDQLPFALFLFGLVGAVFQWFLYGNWLSGIVSEYTVAAFFGGFSI VLPILLIGFSIWLFRNPQKTHDNIRVSIGLFMFSSFSAAFLHFSAGFPYPSSGIRILSTAGGIIGWLVGLPLTTLPSYLA KTVCIIFIVLSVSVISKTPISKIVRVIFRYAKWLFNSDSVKTSPNSSVSSSSEHQELTGRDMPDTAGDNRHDETVTVLSG TSLTGSPVSEYRGESSDYALPSLDILNSYPPVKHDDAENEKVITALSGVLRQFSVNARFSGFSRGPTVTQYELELGEGVK VERIIALTKNISYAVASDKVSILSPIPGKSAIGIEIPNKKRELVALGSVLQSIHPDAHPMTVGLGKDSSGGFVLTNLTTM PHLLVAGATGSGKSSFVNSMITSILLRAHPSQVRLVLIDPKRVELAIYSGVPHLITPIVTDPKKASEVLQWVVKEMERRY DDLASFGFRHIDDFNLAVRAKKIASDSRELTPYPYLLVIVDELADLMLVAAKDVEESIVRITQLARASGIHIVLATQRPS VNVVTGLIKANVPSRLAFAVSSLVDSRVILDRPGAEKLVGQGDGLFLPISAGKPIRIQSSWVTENEILRVVEYVKSQAHP DYYVLEVQNQGNIDSHIGDDMPLLLKATELVINSQLGSTSMLQRKLRVGFAKAGRLMDLMESMGIVGPGQGSKAREVLVT PQDLDSTLARISASVSDSKLD
Sequences:
>Translated_741_residues MSAKKSYLKVWRGLAGAAGSCARVFSKKSLARRDRRDQLPFALFLFGLVGAVFQWFLYGNWLSGIVSEYTVAAFFGGFSI VLPILLIGFSIWLFRNPQKTHDNIRVSIGLFMFSSFSAAFLHFSAGFPYPSSGIRILSTAGGIIGWLVGLPLTTLPSYLA KTVCIIFIVLSVSVISKTPISKIVRVIFRYAKWLFNSDSVKTSPNSSVSSSSEHQELTGRDMPDTAGDNRHDETVTVLSG TSLTGSPVSEYRGESSDYALPSLDILNSYPPVKHDDAENEKVITALSGVLRQFSVNARFSGFSRGPTVTQYELELGEGVK VERIIALTKNISYAVASDKVSILSPIPGKSAIGIEIPNKKRELVALGSVLQSIHPDAHPMTVGLGKDSSGGFVLTNLTTM PHLLVAGATGSGKSSFVNSMITSILLRAHPSQVRLVLIDPKRVELAIYSGVPHLITPIVTDPKKASEVLQWVVKEMERRY DDLASFGFRHIDDFNLAVRAKKIASDSRELTPYPYLLVIVDELADLMLVAAKDVEESIVRITQLARASGIHIVLATQRPS VNVVTGLIKANVPSRLAFAVSSLVDSRVILDRPGAEKLVGQGDGLFLPISAGKPIRIQSSWVTENEILRVVEYVKSQAHP DYYVLEVQNQGNIDSHIGDDMPLLLKATELVINSQLGSTSMLQRKLRVGFAKAGRLMDLMESMGIVGPGQGSKAREVLVT PQDLDSTLARISASVSDSKLD >Mature_740_residues SAKKSYLKVWRGLAGAAGSCARVFSKKSLARRDRRDQLPFALFLFGLVGAVFQWFLYGNWLSGIVSEYTVAAFFGGFSIV LPILLIGFSIWLFRNPQKTHDNIRVSIGLFMFSSFSAAFLHFSAGFPYPSSGIRILSTAGGIIGWLVGLPLTTLPSYLAK TVCIIFIVLSVSVISKTPISKIVRVIFRYAKWLFNSDSVKTSPNSSVSSSSEHQELTGRDMPDTAGDNRHDETVTVLSGT SLTGSPVSEYRGESSDYALPSLDILNSYPPVKHDDAENEKVITALSGVLRQFSVNARFSGFSRGPTVTQYELELGEGVKV ERIIALTKNISYAVASDKVSILSPIPGKSAIGIEIPNKKRELVALGSVLQSIHPDAHPMTVGLGKDSSGGFVLTNLTTMP HLLVAGATGSGKSSFVNSMITSILLRAHPSQVRLVLIDPKRVELAIYSGVPHLITPIVTDPKKASEVLQWVVKEMERRYD DLASFGFRHIDDFNLAVRAKKIASDSRELTPYPYLLVIVDELADLMLVAAKDVEESIVRITQLARASGIHIVLATQRPSV NVVTGLIKANVPSRLAFAVSSLVDSRVILDRPGAEKLVGQGDGLFLPISAGKPIRIQSSWVTENEILRVVEYVKSQAHPD YYVLEVQNQGNIDSHIGDDMPLLLKATELVINSQLGSTSMLQRKLRVGFAKAGRLMDLMESMGIVGPGQGSKAREVLVTP QDLDSTLARISASVSDSKLD
Specific function: DNA motor protein, which is both required to move DNA out of the region of the septum during cell division and for the septum formation. Tracks DNA in an ATP-dependent manner by generating positive supercoils in front of it and negative supercoils behind
COG id: COG1674
COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein. Note=Located at the septum. The large C-terminal part of the protein is cytoplasmic (Potential)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FtsK domain
Homologues:
Organism=Escherichia coli, GI1787117, Length=493, Percent_Identity=41.1764705882353, Blast_Score=365, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTSK_TROW8 (Q83MI4)
Other databases:
- EMBL: BX251412 - RefSeq: NP_789557.1 - ProteinModelPortal: Q83MI4 - SMR: Q83MI4 - STRING: Q83MI4 - GeneID: 1064836 - GenomeReviews: BX072543_GR - KEGG: tws:TW631 - eggNOG: COG1674 - HOGENOM: HBG662140 - OMA: SFGFRHI - ProtClustDB: CLSK375802 - BioCyc: TWHI218496:TW0602-MONOMER - InterPro: IPR003593 - InterPro: IPR018541 - InterPro: IPR002543 - SMART: SM00382 - SMART: SM00843
Pfam domain/function: PF09397 Ftsk_gamma; PF01580 FtsK_SpoIIIE
EC number: NA
Molecular weight: Translated: 80532; Mature: 80401
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS50901 FTSK; PS00053 RIBOSOMAL_S8
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xced054c)-; HASH(0xb93dde4)-; HASH(0xcced394)-; HASH(0xc106ecc)-; HASH(0xbe333e8)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKKSYLKVWRGLAGAAGSCARVFSKKSLARRDRRDQLPFALFLFGLVGAVFQWFLYGN CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH WLSGIVSEYTVAAFFGGFSIVLPILLIGFSIWLFRNPQKTHDNIRVSIGLFMFSSFSAAF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEHHHHHHHHHHHH LHFSAGFPYPSSGIRILSTAGGIIGWLVGLPLTTLPSYLAKTVCIIFIVLSVSVISKTPI HEEECCCCCCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH SKIVRVIFRYAKWLFNSDSVKTSPNSSVSSSSEHQELTGRDMPDTAGDNRHDETVTVLSG HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEC TSLTGSPVSEYRGESSDYALPSLDILNSYPPVKHDDAENEKVITALSGVLRQFSVNARFS CCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC GFSRGPTVTQYELELGEGVKVERIIALTKNISYAVASDKVSILSPIPGKSAIGIEIPNKK CCCCCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCEEEECCCCCCCEEEEECCCCH RELVALGSVLQSIHPDAHPMTVGLGKDSSGGFVLTNLTTMPHLLVAGATGSGKSSFVNSM HHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHH ITSILLRAHPSQVRLVLIDPKRVELAIYSGVPHLITPIVTDPKKASEVLQWVVKEMERRY HHHHHHHCCCCCEEEEEECCCEEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH DDLASFGFRHIDDFNLAVRAKKIASDSRELTPYPYLLVIVDELADLMLVAAKDVEESIVR HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ITQLARASGIHIVLATQRPSVNVVTGLIKANVPSRLAFAVSSLVDSRVILDRPGAEKLVG HHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCHHHHHC QGDGLFLPISAGKPIRIQSSWVTENEILRVVEYVKSQAHPDYYVLEVQNQGNIDSHIGDD CCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCC MPLLLKATELVINSQLGSTSMLQRKLRVGFAKAGRLMDLMESMGIVGPGQGSKAREVLVT CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC PQDLDSTLARISASVSDSKLD CHHHHHHHHHHHHCCCCCCCH >Mature Secondary Structure SAKKSYLKVWRGLAGAAGSCARVFSKKSLARRDRRDQLPFALFLFGLVGAVFQWFLYGN CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH WLSGIVSEYTVAAFFGGFSIVLPILLIGFSIWLFRNPQKTHDNIRVSIGLFMFSSFSAAF HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEHHHHHHHHHHHH LHFSAGFPYPSSGIRILSTAGGIIGWLVGLPLTTLPSYLAKTVCIIFIVLSVSVISKTPI HEEECCCCCCCCCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH SKIVRVIFRYAKWLFNSDSVKTSPNSSVSSSSEHQELTGRDMPDTAGDNRHDETVTVLSG HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEEC TSLTGSPVSEYRGESSDYALPSLDILNSYPPVKHDDAENEKVITALSGVLRQFSVNARFS CCCCCCCHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC GFSRGPTVTQYELELGEGVKVERIIALTKNISYAVASDKVSILSPIPGKSAIGIEIPNKK CCCCCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCEEEECCCCCCCEEEEECCCCH RELVALGSVLQSIHPDAHPMTVGLGKDSSGGFVLTNLTTMPHLLVAGATGSGKSSFVNSM HHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHH ITSILLRAHPSQVRLVLIDPKRVELAIYSGVPHLITPIVTDPKKASEVLQWVVKEMERRY HHHHHHHCCCCCEEEEEECCCEEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH DDLASFGFRHIDDFNLAVRAKKIASDSRELTPYPYLLVIVDELADLMLVAAKDVEESIVR HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ITQLARASGIHIVLATQRPSVNVVTGLIKANVPSRLAFAVSSLVDSRVILDRPGAEKLVG HHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCHHHHHC QGDGLFLPISAGKPIRIQSSWVTENEILRVVEYVKSQAHPDYYVLEVQNQGNIDSHIGDD CCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHCCCC MPLLLKATELVINSQLGSTSMLQRKLRVGFAKAGRLMDLMESMGIVGPGQGSKAREVLVT CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEC PQDLDSTLARISASVSDSKLD CHHHHHHHHHHHHCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12606174