| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is ftsQ [H]
Identifier: 28572688
GI number: 28572688
Start: 574920
End: 575669
Strand: Reverse
Name: ftsQ [H]
Synonym: TW540
Alternate gene names: 28572688
Gene position: 575669-574920 (Counterclockwise)
Preceding gene: 28572689
Following gene: 28572686
Centisome position: 62.17
GC content: 45.07
Gene sequence:
>750_bases ATGACAGTTGTAGATAATGCCTATCAGAACTTTCTTTATTGCCGCAAGCAGCGCAAAGATTACGAGAGGGTCTGTAAGAT ACGCACAAAGATTATAAGGAGGTTTATCCTGCTTGCATGCGCTGTCTTTCTACTGTTTTGTATGCTTTCGGCTTATTCAC CAGTTATGTCTCTGCGCAGTATCCGAGTGGCTGGCAATATGCAAGTCAAGACCGATGATATAGTGGCCGCTCTTCGCGGG GAGTTTAACAAACCACTTGCCTTTGTTGATCCGGAAACTGTTAGAAAAAAGCTGGCTAAATTTAAGTTACTAAAGGAGGT TACAGTGGAAGCCAAACCCCCAGGGGCGATACTTGTTAGAGTCTCCGAACGTGTGCCGCTCGCCTTTTTAGAGAGACCGG ACGGCTTTCATGTGCTGGATGAAGACGGCGTTTCGCTGAAGGTAACCCAAAGTCCCCCATTGGGAATGGTAAGAATTGAT GTGAAAGATGGTAATCAAGAGCAGCTTGTTGCTTCCCTTGGGTGGGTAATTGCAAATATTCCAGATGCCCTTAAAAAACG TGTAGACCTCATTTCTGCCGAGACCCCATCGGGAATAAATCTCAAACTTGATAACAGTACTAAAACCGTGTTTTGGGGTA GTTTTCAAAACAGCAAACTAAAAGCAAAAGTGCTTGAAAAGCTGTTATCCATTCCCGGGCATTACAGTAGTTTTAATGTC TCCGCACCAGAAGCCCCAGCAGTGAGCTAG
Upstream 100 bases:
>100_bases TTATCACACTTGGTTGTGGAGATGTTTATAAGATAATTCCAAGTATTGTCGAACAGCTTAGATCCGCAAGATGAGTGCGA ATTCGGTGACGGTTTAGATA
Downstream 100 bases:
>100_bases GCCGATAGTTTTTAGCATATGTGTTCTTATTTGTGTGTGTAATGGGGGATGCTTAGTGTCAAGGCTCACACTCCAAATCC AGCACGCGTTATCATCAGCC
Product: cell division protein FtsQ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTVVDNAYQNFLYCRKQRKDYERVCKIRTKIIRRFILLACAVFLLFCMLSAYSPVMSLRSIRVAGNMQVKTDDIVAALRG EFNKPLAFVDPETVRKKLAKFKLLKEVTVEAKPPGAILVRVSERVPLAFLERPDGFHVLDEDGVSLKVTQSPPLGMVRID VKDGNQEQLVASLGWVIANIPDALKKRVDLISAETPSGINLKLDNSTKTVFWGSFQNSKLKAKVLEKLLSIPGHYSSFNV SAPEAPAVS
Sequences:
>Translated_249_residues MTVVDNAYQNFLYCRKQRKDYERVCKIRTKIIRRFILLACAVFLLFCMLSAYSPVMSLRSIRVAGNMQVKTDDIVAALRG EFNKPLAFVDPETVRKKLAKFKLLKEVTVEAKPPGAILVRVSERVPLAFLERPDGFHVLDEDGVSLKVTQSPPLGMVRID VKDGNQEQLVASLGWVIANIPDALKKRVDLISAETPSGINLKLDNSTKTVFWGSFQNSKLKAKVLEKLLSIPGHYSSFNV SAPEAPAVS >Mature_248_residues TVVDNAYQNFLYCRKQRKDYERVCKIRTKIIRRFILLACAVFLLFCMLSAYSPVMSLRSIRVAGNMQVKTDDIVAALRGE FNKPLAFVDPETVRKKLAKFKLLKEVTVEAKPPGAILVRVSERVPLAFLERPDGFHVLDEDGVSLKVTQSPPLGMVRIDV KDGNQEQLVASLGWVIANIPDALKKRVDLISAETPSGINLKLDNSTKTVFWGSFQNSKLKAKVLEKLLSIPGHYSSFNVS APEAPAVS
Specific function: This protein may be involved in septum formation [H]
COG id: COG1589
COG function: function code M; Cell division septal protein
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsQ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005548 - InterPro: IPR013685 [H]
Pfam domain/function: PF03799 FtsQ; PF08478 POTRA_1 [H]
EC number: NA
Molecular weight: Translated: 27764; Mature: 27633
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVVDNAYQNFLYCRKQRKDYERVCKIRTKIIRRFILLACAVFLLFCMLSAYSPVMSLRS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRVAGNMQVKTDDIVAALRGEFNKPLAFVDPETVRKKLAKFKLLKEVTVEAKPPGAILVR EEEECCEEECHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE VSERVPLAFLERPDGFHVLDEDGVSLKVTQSPPLGMVRIDVKDGNQEQLVASLGWVIANI ECCCCCEEEEECCCCCEEECCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCC PDALKKRVDLISAETPSGINLKLDNSTKTVFWGSFQNSKLKAKVLEKLLSIPGHYSSFNV HHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC SAPEAPAVS CCCCCCCCC >Mature Secondary Structure TVVDNAYQNFLYCRKQRKDYERVCKIRTKIIRRFILLACAVFLLFCMLSAYSPVMSLRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IRVAGNMQVKTDDIVAALRGEFNKPLAFVDPETVRKKLAKFKLLKEVTVEAKPPGAILVR EEEECCEEECHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE VSERVPLAFLERPDGFHVLDEDGVSLKVTQSPPLGMVRIDVKDGNQEQLVASLGWVIANI ECCCCCEEEEECCCCCEEECCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCC PDALKKRVDLISAETPSGINLKLDNSTKTVFWGSFQNSKLKAKVLEKLLSIPGHYSSFNV HHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCC SAPEAPAVS CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]