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The map label for this gene is 28572683

Identifier: 28572683

GI number: 28572683

Start: 571987

End: 572463

Strand: Reverse

Name: 28572683

Synonym: TW534

Alternate gene names: NA

Gene position: 572463-571987 (Counterclockwise)

Preceding gene: 28572684

Following gene: 28572682

Centisome position: 61.83

GC content: 48.43

Gene sequence:

>477_bases
TTGTCTGGAAATCTTGCTGAGGCGCGGCAGAGGGCTGGGTACAGAGGCGTTGTTGCGGCCCGTGTTGCGGGTATCACGTA
CCGGCAGCTGGATTATTGGGCTCGAACAGGCCTCTTGATTCCTACAGTTCAGGAGGCTAGTGGGTCTGGCAGTCAGAGGA
TATATGATTTCAAAGATATTCTTGTGCTGAAGCTTGTTAGGCGGCTTCTTGATGTTGGTATAAGCCTCCAACAGATTCGG
GTTGCCGTTGAGCAGCTTCGTTCCGCGGGCTTGAAGGATTTATCGGCTGTAACCCTTATGAGTGACGGTGTAAGTGTCTA
TCTATGCAGGTCTAATAGTGATGTTATTGATCTTTTAGCAAAGGGTCAGGGTGTTTTTGGAATTGCCGTTGGCAAGGTTC
TTCGCGAAATAGAGGATACTTTGACCGGTATTGAGTCTCGCGAGATGAATGCCGAGAGAAAGTATCTTTTATTGTAG

Upstream 100 bases:

>100_bases
AGATTTTTTACAAAGTTCTAAATCTAAGATTGATCCAAAAGATTTGGCCAGTTCTTAAGCTAAAGTTTCTACAGGATCTT
TTGTAAATCGAGGAGTTGCT

Downstream 100 bases:

>100_bases
ATGCGCTGTCTGTTTTGCCGGTCTGATGATACAAAGGTTATAGATTCCAGGACATCTGAGGACGGCATAAGCATAAGGCG
TCGCCGTGAATGCCAGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSGNLAEARQRAGYRGVVAARVAGITYRQLDYWARTGLLIPTVQEASGSGSQRIYDFKDILVLKLVRRLLDVGISLQQIR
VAVEQLRSAGLKDLSAVTLMSDGVSVYLCRSNSDVIDLLAKGQGVFGIAVGKVLREIEDTLTGIESREMNAERKYLLL

Sequences:

>Translated_158_residues
MSGNLAEARQRAGYRGVVAARVAGITYRQLDYWARTGLLIPTVQEASGSGSQRIYDFKDILVLKLVRRLLDVGISLQQIR
VAVEQLRSAGLKDLSAVTLMSDGVSVYLCRSNSDVIDLLAKGQGVFGIAVGKVLREIEDTLTGIESREMNAERKYLLL
>Mature_157_residues
SGNLAEARQRAGYRGVVAARVAGITYRQLDYWARTGLLIPTVQEASGSGSQRIYDFKDILVLKLVRRLLDVGISLQQIRV
AVEQLRSAGLKDLSAVTLMSDGVSVYLCRSNSDVIDLLAKGQGVFGIAVGKVLREIEDTLTGIESREMNAERKYLLL

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17329; Mature: 17198

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNLAEARQRAGYRGVVAARVAGITYRQLDYWARTGLLIPTVQEASGSGSQRIYDFKDI
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHH
LVLKLVRRLLDVGISLQQIRVAVEQLRSAGLKDLSAVTLMSDGVSVYLCRSNSDVIDLLA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHEECCCCEEEEECCCCHHHHHHH
KGQGVFGIAVGKVLREIEDTLTGIESREMNAERKYLLL
CCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEECC
>Mature Secondary Structure 
SGNLAEARQRAGYRGVVAARVAGITYRQLDYWARTGLLIPTVQEASGSGSQRIYDFKDI
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHH
LVLKLVRRLLDVGISLQQIRVAVEQLRSAGLKDLSAVTLMSDGVSVYLCRSNSDVIDLLA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHEECCCCEEEEECCCCHHHHHHH
KGQGVFGIAVGKVLREIEDTLTGIESREMNAERKYLLL
CCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]