| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is secG [H]
Identifier: 28572618
GI number: 28572618
Start: 503234
End: 503530
Strand: Reverse
Name: secG [H]
Synonym: TW469
Alternate gene names: 28572618
Gene position: 503530-503234 (Counterclockwise)
Preceding gene: 28572619
Following gene: 28572617
Centisome position: 54.38
GC content: 45.79
Gene sequence:
>297_bases ATGTGTTTGTGCTTTCTCGGCTTTGTGCCTGTTTTTTTGACTGAGGATGTTTTGATCGTTCTAAAGCTTGTGCTACTTGG GATTGTTGTTTTGACGAGTTTTGCCCTTGTTTTGCTTATACTGTTGCATAAGGGAAGGGGTGGCGGACTGTCAGATATGT TCGGGGGCGGTATTACCGTTTCCTTTGCATCAAGCGGTGTGGCCGAGCGTAACTTGAATCGCCTTACTGTTATGCTTGCC CTTCTTTGGGGTGTTACAATTATCACTCTCTCGGTTCTAGCAAGGTTTCGCCTTTAG
Upstream 100 bases:
>100_bases CATTCTTGTTGGCAGAGCTTCCTTGAATGCATCTGATTTCGCATCCCTGATAAAGACGTGCTGTTTGTAAATCTGGTGTA TACTCGGGTTTGCGAACTGC
Downstream 100 bases:
>100_bases GGCATTGCGTGTTTGGAGTATTGCTTTAGTATGCGTTGCTCGCTTGTTTGTATTCTATAAGTCTGGTGGTTATGAAGCAG CCTTCTGTCTCTGATAAGAA
Product: preprotein translocase subunit SecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MCLCFLGFVPVFLTEDVLIVLKLVLLGIVVLTSFALVLLILLHKGRGGGLSDMFGGGITVSFASSGVAERNLNRLTVMLA LLWGVTIITLSVLARFRL
Sequences:
>Translated_98_residues MCLCFLGFVPVFLTEDVLIVLKLVLLGIVVLTSFALVLLILLHKGRGGGLSDMFGGGITVSFASSGVAERNLNRLTVMLA LLWGVTIITLSVLARFRL >Mature_98_residues MCLCFLGFVPVFLTEDVLIVLKLVLLGIVVLTSFALVLLILLHKGRGGGLSDMFGGGITVSFASSGVAERNLNRLTVMLA LLWGVTIITLSVLARFRL
Specific function: Involved in protein export. Participates in an early event of protein translocation [H]
COG id: COG1314
COG function: function code U; Preprotein translocase subunit SecG
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004692 [H]
Pfam domain/function: PF03840 SecG [H]
EC number: NA
Molecular weight: Translated: 10505; Mature: 10505
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLCFLGFVPVFLTEDVLIVLKLVLLGIVVLTSFALVLLILLHKGRGGGLSDMFGGGITV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEE SFASSGVAERNLNRLTVMLALLWGVTIITLSVLARFRL ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MCLCFLGFVPVFLTEDVLIVLKLVLLGIVVLTSFALVLLILLHKGRGGGLSDMFGGGITV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEE SFASSGVAERNLNRLTVMLALLWGVTIITLSVLARFRL ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]