| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is aroQ [H]
Identifier: 28572553
GI number: 28572553
Start: 436368
End: 436817
Strand: Direct
Name: aroQ [H]
Synonym: TW400
Alternate gene names: 28572553
Gene position: 436368-436817 (Clockwise)
Preceding gene: 28572552
Following gene: 28572554
Centisome position: 47.13
GC content: 41.11
Gene sequence:
>450_bases GTGAGTAAGAAGAAAATCTATATTCTCAATGGACCGAATCTTGCTATGCTTGGCAGTCGTCAGCCTGAAATATACGGCAC GATAACTCTGGAACAGATAAAACAAGAGCTGACTGAATTTTCCAATGATGTTATTGAATTACTTTTTTATCAGACAAATG ATGAGGCAGAGATGCTAGATTACATTTATCAGGCAAGACAGGATGCCTGTGGTGTAATTATCAATCCTGCGGCTTTTACA CACTACAGCTATTCTCTTAGCGATGCTCTTATTTTGCTACGGGAGCGGGGTATTGCAGTTATTGAGGTTCATCTTTCAAA TCCGTATGCCAGGGAGAGTTTTAGGCACAAAAATGTTATATCCCGTGTTGTTAACGCACAGGTTTCAGGGCTGGGGGTTG ATTCGTATAGACTTGCCCTTGACCATATCGTACGAAAGATAGCATGTTAG
Upstream 100 bases:
>100_bases CCATGTTTCCTCAATAGAGGCGTATATTGTTCAGATCCTTTATCGTATACATAAAGGGTGTTTGCAGTGGCGAAATTCCA GGATAACCAAGTGGAGATGT
Downstream 100 bases:
>100_bases GTGTTGGACATTTGAAAGGGGATTGTGGCGTCAACTTCCGATATCCGTAATGGTGTTGTTCTCAATATAAATGGGCAACT GAATACAGTGATCGAGTTTC
Product: 3-dehydroquinate dehydratase
Products: NA
Alternate protein names: 3-dehydroquinase; Type II DHQase [H]
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSKKKIYILNGPNLAMLGSRQPEIYGTITLEQIKQELTEFSNDVIELLFYQTNDEAEMLDYIYQARQDACGVIINPAAFT HYSYSLSDALILLRERGIAVIEVHLSNPYARESFRHKNVISRVVNAQVSGLGVDSYRLALDHIVRKIAC
Sequences:
>Translated_149_residues MSKKKIYILNGPNLAMLGSRQPEIYGTITLEQIKQELTEFSNDVIELLFYQTNDEAEMLDYIYQARQDACGVIINPAAFT HYSYSLSDALILLRERGIAVIEVHLSNPYARESFRHKNVISRVVNAQVSGLGVDSYRLALDHIVRKIAC >Mature_148_residues SKKKIYILNGPNLAMLGSRQPEIYGTITLEQIKQELTEFSNDVIELLFYQTNDEAEMLDYIYQARQDACGVIINPAAFTH YSYSLSDALILLRERGIAVIEVHLSNPYARESFRHKNVISRVVNAQVSGLGVDSYRLALDHIVRKIAC
Specific function: Catalyzes a trans-dehydration via an enolate intermediate [H]
COG id: COG0757
COG function: function code E; 3-dehydroquinate dehydratase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type-II 3-dehydroquinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001874 - InterPro: IPR018509 - ProDom: PD004527 [H]
Pfam domain/function: PF01220 DHquinase_II [H]
EC number: =4.2.1.10 [H]
Molecular weight: Translated: 16909; Mature: 16777
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS01029 DEHYDROQUINASE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKKIYILNGPNLAMLGSRQPEIYGTITLEQIKQELTEFSNDVIELLFYQTNDEAEMLD CCCCEEEEEECCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHEEECCCCHHHHHH YIYQARQDACGVIINPAAFTHYSYSLSDALILLRERGIAVIEVHLSNPYARESFRHKNVI HHHHHHCCCCCEEECCHHHEEEEHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHH SRVVNAQVSGLGVDSYRLALDHIVRKIAC HHHHHHHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SKKKIYILNGPNLAMLGSRQPEIYGTITLEQIKQELTEFSNDVIELLFYQTNDEAEMLD CCCEEEEEECCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHEEECCCCHHHHHH YIYQARQDACGVIINPAAFTHYSYSLSDALILLRERGIAVIEVHLSNPYARESFRHKNVI HHHHHHCCCCCEEECCHHHEEEEHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHH SRVVNAQVSGLGVDSYRLALDHIVRKIAC HHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA