Click here to switch to the map view.

The map label for this gene is 28572540

Identifier: 28572540

GI number: 28572540

Start: 421191

End: 422609

Strand: Direct

Name: 28572540

Synonym: TW387

Alternate gene names: NA

Gene position: 421191-422609 (Clockwise)

Preceding gene: 28572539

Following gene: 28572541

Centisome position: 45.49

GC content: 45.95

Gene sequence:

>1419_bases
TTGACAGATTTTCGTGCTGTGCCCTTAGCTTTATCGGCCTGGACTACATCTGTTTTGTTGGTGCAACACGTTAGGCTGTG
GTTCCTCGTATTTGCCCTTTTCGTGCCGTTTTTGTTTACCACCTTCAGATATACTGCCATTGGGTGCGCAGCAACAAGTA
TCGCGATATGTTCTATATTTTTTGTTATTGAGCCCATTCGAGAGCCTCCTGCTCTTCTTTCTGCAACAACCACGAATTCC
GTTCATAAGCTTGTTGTAAGGATTGACTCGTTGCCCCGCAGCAGTGCCTATGCCTCGAATTTAAAATGCACCTTGCTTGA
GATAGACACTTATTCTGACCTATCTGTTCCATGCGCCCTGAGAGGTGATACTGCGTATTCGGTTGGAAGTGCTATCGCTC
TCAATGGCAAGCTCAAGAAGGCGCCCCCGGGCCGGCGTGAGAGTGTTTATATATCTCCTGTCAGCGACCCGAAACCCGTA
CGCCATTCGCCTTGGTATCTGGACTGGGCGAATTATCTTCGAAATGGTGTATTCGAAAAGGTCTCTTCCATACCTGGTGA
CGGGGGAAAGCTGCTTTTAGGTTTATCAGTTGGAGATACACGTGGCGTAGGACAATCGCTTGACAAAGCCATGAAGGATA
CTTCTCTAAGTCACCTAACTGCCGTTTCTGGATCAAATTGTGCAATGGTTGTGGCTATCATTGCGAGGCTTTTTAGTTTC
TTGAGGGTACGCTTTAGGGTTATTGTATCCATTCTTTCTCTTCTCCTTTTTGTGATACTGGTTATTCCCGATTCCAGTAT
TGTTCGTGCAGCAATTATGGCTTTGGCAACCCTGTGTGGACTCTATTCAGGCCGTATAGGTGTTGGCCTGCCAGTTTTGT
CTCTTGCTGTTTTAGGTATGCTTCTGTGGAATCCGTGGTTTGCTTGCGATTATGGATTTTTACTCTCCGTTGCAGCTACT
GCGGGTATCTTACTCATGTCAAAATCGATTGAAATTAGAATGCAGTCTATGAGATTTTTGAGATTGAATCTGGGGCCTAT
TGCGCCACTGATTGCTGTACCATTATCTGCTCAACTTGCTTGCCAGCCAATACTTGTATTGATTACTCCACAAATACCAC
TTACGGGTGTTGTGGCTAATGCAATCTCAGAGCCTGTTGTCCCAATTGCAACAATTCTTGGTCTTCTTGCGGTTTTATTC
TCACCAATTGACATGGTGTCGCACCTTTTTCTTATGCTTGGATACTTACCGTCTGAGTGGATTGCGCGTGTCGCTCGTGC
TCTCGCCTTTATTCCACCGCTTCCATTTCCGGGTGGTGTTCTGGGCGTTATGCTCCTGATCACTCTAACATTGAGCATTA
TTTTTGTCGTTAGAAGATTGACGGGCACGACAGTGCCCATGCAAAAGAGCAAAGTATGA

Upstream 100 bases:

>100_bases
GGCGCAACAAACACGGACCCTTCAAAAGGCTGGAGGATCTGAAAAAAATATCTGGTATAGGTAACAAACTTATCAAGAGC
ATAAAAGACAAGGTTATACT

Downstream 100 bases:

>100_bases
AGAAATATCGTTTGGCTATTGCACTATCAGCTGTTCTCTCAGCAATTTTTGTGTATTTTGCTGCGTTTACAGGAGGGCAA
AATTGGGTCGTAGCTGTGTG

Product: DNA uptake protein

Products: NA

Alternate protein names: DNA Internalization-Related Competence; Integral Membrane Protein; ComEC/Rec2-Like Protein; ComE Operon; Competence Protein; DNA Uptake Protein; DNA Uptake Membrane Protein; Hydrolase-Like Protein; DNA Internalization Competence; COME Operon; ComEC/Rec2-Related Domain-Containing Protein; ComEC Operon Protein; Conserved ComA-Like Protein; Transmembrane Protein Related ComA; ComEC/Rec2-Related Protein Protein; Competence Protein ComEC; ComEC/Rec2 Related Protein

Number of amino acids: Translated: 472; Mature: 471

Protein sequence:

>472_residues
MTDFRAVPLALSAWTTSVLLVQHVRLWFLVFALFVPFLFTTFRYTAIGCAATSIAICSIFFVIEPIREPPALLSATTTNS
VHKLVVRIDSLPRSSAYASNLKCTLLEIDTYSDLSVPCALRGDTAYSVGSAIALNGKLKKAPPGRRESVYISPVSDPKPV
RHSPWYLDWANYLRNGVFEKVSSIPGDGGKLLLGLSVGDTRGVGQSLDKAMKDTSLSHLTAVSGSNCAMVVAIIARLFSF
LRVRFRVIVSILSLLLFVILVIPDSSIVRAAIMALATLCGLYSGRIGVGLPVLSLAVLGMLLWNPWFACDYGFLLSVAAT
AGILLMSKSIEIRMQSMRFLRLNLGPIAPLIAVPLSAQLACQPILVLITPQIPLTGVVANAISEPVVPIATILGLLAVLF
SPIDMVSHLFLMLGYLPSEWIARVARALAFIPPLPFPGGVLGVMLLITLTLSIIFVVRRLTGTTVPMQKSKV

Sequences:

>Translated_472_residues
MTDFRAVPLALSAWTTSVLLVQHVRLWFLVFALFVPFLFTTFRYTAIGCAATSIAICSIFFVIEPIREPPALLSATTTNS
VHKLVVRIDSLPRSSAYASNLKCTLLEIDTYSDLSVPCALRGDTAYSVGSAIALNGKLKKAPPGRRESVYISPVSDPKPV
RHSPWYLDWANYLRNGVFEKVSSIPGDGGKLLLGLSVGDTRGVGQSLDKAMKDTSLSHLTAVSGSNCAMVVAIIARLFSF
LRVRFRVIVSILSLLLFVILVIPDSSIVRAAIMALATLCGLYSGRIGVGLPVLSLAVLGMLLWNPWFACDYGFLLSVAAT
AGILLMSKSIEIRMQSMRFLRLNLGPIAPLIAVPLSAQLACQPILVLITPQIPLTGVVANAISEPVVPIATILGLLAVLF
SPIDMVSHLFLMLGYLPSEWIARVARALAFIPPLPFPGGVLGVMLLITLTLSIIFVVRRLTGTTVPMQKSKV
>Mature_471_residues
TDFRAVPLALSAWTTSVLLVQHVRLWFLVFALFVPFLFTTFRYTAIGCAATSIAICSIFFVIEPIREPPALLSATTTNSV
HKLVVRIDSLPRSSAYASNLKCTLLEIDTYSDLSVPCALRGDTAYSVGSAIALNGKLKKAPPGRRESVYISPVSDPKPVR
HSPWYLDWANYLRNGVFEKVSSIPGDGGKLLLGLSVGDTRGVGQSLDKAMKDTSLSHLTAVSGSNCAMVVAIIARLFSFL
RVRFRVIVSILSLLLFVILVIPDSSIVRAAIMALATLCGLYSGRIGVGLPVLSLAVLGMLLWNPWFACDYGFLLSVAATA
GILLMSKSIEIRMQSMRFLRLNLGPIAPLIAVPLSAQLACQPILVLITPQIPLTGVVANAISEPVVPIATILGLLAVLFS
PIDMVSHLFLMLGYLPSEWIARVARALAFIPPLPFPGGVLGVMLLITLTLSIIFVVRRLTGTTVPMQKSKV

Specific function: Unknown

COG id: COG0658

COG function: function code R; Predicted membrane metal-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50873; Mature: 50741

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFRAVPLALSAWTTSVLLVQHVRLWFLVFALFVPFLFTTFRYTAIGCAATSIAICSIF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVIEPIREPPALLSATTTNSVHKLVVRIDSLPRSSAYASNLKCTLLEIDTYSDLSVPCAL
HHHHHCCCCCHHEEECCHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEEECCCCCCCCEEE
RGDTAYSVGSAIALNGKLKKAPPGRRESVYISPVSDPKPVRHSPWYLDWANYLRNGVFEK
CCCCCHHCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHH
VSSIPGDGGKLLLGLSVGDTRGVGQSLDKAMKDTSLSHLTAVSGSNCAMVVAIIARLFSF
HHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHH
LRVRFRVIVSILSLLLFVILVIPDSSIVRAAIMALATLCGLYSGRIGVGLPVLSLAVLGM
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LLWNPWFACDYGFLLSVAATAGILLMSKSIEIRMQSMRFLRLNLGPIAPLIAVPLSAQLA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHC
CQPILVLITPQIPLTGVVANAISEPVVPIATILGLLAVLFSPIDMVSHLFLMLGYLPSEW
CCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHH
IARVARALAFIPPLPFPGGVLGVMLLITLTLSIIFVVRRLTGTTVPMQKSKV
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TDFRAVPLALSAWTTSVLLVQHVRLWFLVFALFVPFLFTTFRYTAIGCAATSIAICSIF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVIEPIREPPALLSATTTNSVHKLVVRIDSLPRSSAYASNLKCTLLEIDTYSDLSVPCAL
HHHHHCCCCCHHEEECCHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEEECCCCCCCCEEE
RGDTAYSVGSAIALNGKLKKAPPGRRESVYISPVSDPKPVRHSPWYLDWANYLRNGVFEK
CCCCCHHCCCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHH
VSSIPGDGGKLLLGLSVGDTRGVGQSLDKAMKDTSLSHLTAVSGSNCAMVVAIIARLFSF
HHCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHH
LRVRFRVIVSILSLLLFVILVIPDSSIVRAAIMALATLCGLYSGRIGVGLPVLSLAVLGM
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LLWNPWFACDYGFLLSVAATAGILLMSKSIEIRMQSMRFLRLNLGPIAPLIAVPLSAQLA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHC
CQPILVLITPQIPLTGVVANAISEPVVPIATILGLLAVLFSPIDMVSHLFLMLGYLPSEW
CCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHH
IARVARALAFIPPLPFPGGVLGVMLLITLTLSIIFVVRRLTGTTVPMQKSKV
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA