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The map label for this gene is rpiB [H]

Identifier: 28572526

GI number: 28572526

Start: 406008

End: 406475

Strand: Direct

Name: rpiB [H]

Synonym: TW373

Alternate gene names: 28572526

Gene position: 406008-406475 (Clockwise)

Preceding gene: 28572525

Following gene: 28572527

Centisome position: 43.85

GC content: 48.72

Gene sequence:

>468_bases
ATGAGCGGCAGGGTTCATCTGGCTACCGATCATGCCGGTTATGAGTTCTCTAAAGGTCTCTTGAACTTTCTTGCTGATGA
GCATTATCAGGTTGTCCATCATGGTGCAGTTAATTGTGATCCTGAGGATGATTATCCATCTTTCTGCATCGCTGCGGCAG
AAGCTGTAGTACGGGATATTACAGACGGTATTCCATCTCTTGGGGTTGTTATCGGTGGCAGCGGAAACGGTGAACAGATA
GCTGCAAATAAGGTTAAGGGTGCAAGGGCCGCCCTGGCGTGGAATGAGTGTACCGCTCGTCTTGCCAGGGCACACAATAA
TGCAAACGTAGTTGCCATCGGTGCAAGAATGCATGCCCATGACGAGGGTTTTCGGATAGTTTTGGCATTTCTACGGGAAC
CATTCAGTGAGGACTCGCGGCATATCAGAAGGATAGATGCGATAAGTTCGTATGAGTGTCAGTCTTGA

Upstream 100 bases:

>100_bases
GATGCAGTTAGGTTTTTCGATAGCATCGTTTCGGTTTGTTCTTGGAGTGGATTCTATGAGCTCAAGCGTACTCGGAGTGA
AGGTCCGCAAATAGACTGAC

Downstream 100 bases:

>100_bases
TTGTACCTTTGATTTGTTCTCTGACGAATGCCTGAGGGGCATTCAATCCACCGTTCTGCAATTCAATTTGAGCATAATTT
CGTTGGAAAAAAAATAGGGA

Product: ribose-5-phosphate isomerase B

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MSGRVHLATDHAGYEFSKGLLNFLADEHYQVVHHGAVNCDPEDDYPSFCIAAAEAVVRDITDGIPSLGVVIGGSGNGEQI
AANKVKGARAALAWNECTARLARAHNNANVVAIGARMHAHDEGFRIVLAFLREPFSEDSRHIRRIDAISSYECQS

Sequences:

>Translated_155_residues
MSGRVHLATDHAGYEFSKGLLNFLADEHYQVVHHGAVNCDPEDDYPSFCIAAAEAVVRDITDGIPSLGVVIGGSGNGEQI
AANKVKGARAALAWNECTARLARAHNNANVVAIGARMHAHDEGFRIVLAFLREPFSEDSRHIRRIDAISSYECQS
>Mature_154_residues
SGRVHLATDHAGYEFSKGLLNFLADEHYQVVHHGAVNCDPEDDYPSFCIAAAEAVVRDITDGIPSLGVVIGGSGNGEQIA
ANKVKGARAALAWNECTARLARAHNNANVVAIGARMHAHDEGFRIVLAFLREPFSEDSRHIRRIDAISSYECQS

Specific function: In Addition To Its Activity On D-Ribose 5-Phosphate It Probably Also Has Activity On D-Allose 6-Phosphate. [C]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=149, Percent_Identity=32.2147651006711, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011860
- InterPro:   IPR003500 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 16770; Mature: 16639

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRVHLATDHAGYEFSKGLLNFLADEHYQVVHHGAVNCDPEDDYPSFCIAAAEAVVRDI
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
TDGIPSLGVVIGGSGNGEQIAANKVKGARAALAWNECTARLARAHNNANVVAIGARMHAH
HCCCCCCEEEECCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECEECCC
DEGFRIVLAFLREPFSEDSRHIRRIDAISSYECQS
CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SGRVHLATDHAGYEFSKGLLNFLADEHYQVVHHGAVNCDPEDDYPSFCIAAAEAVVRDI
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
TDGIPSLGVVIGGSGNGEQIAANKVKGARAALAWNECTARLARAHNNANVVAIGARMHAH
HCCCCCCEEEECCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECEECCC
DEGFRIVLAFLREPFSEDSRHIRRIDAISSYECQS
CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]