| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
Click here to switch to the map view.
The map label for this gene is 28572431
Identifier: 28572431
GI number: 28572431
Start: 311166
End: 311444
Strand: Direct
Name: 28572431
Synonym: TW275
Alternate gene names: NA
Gene position: 311166-311444 (Clockwise)
Preceding gene: 28572428
Following gene: 28572433
Centisome position: 33.61
GC content: 47.67
Gene sequence:
>279_bases TTGCATACTGACTACGATACCCCCCGGCAGACAGAAGAGCTTACGGAGTCGATTGAGGTCTTAGAGAAGACCGCCACGGA TGATCTCAACACTGACGTTGATGAGGACTTCGATTCTGCTTCTTTTGAGCTGCCTGGCGCAGATCTGTCTGATACTGATC TTGAGGTTGTTGTTATTCCACCTCAGGAAAATGAGTTTACTTGCACTTCTTGCTTTTTGGTGAAGCACCGCTTGCAGCTT AGCTCAGTAGCGAATATGTGTAAAGATTGTGCCGGCTAG
Upstream 100 bases:
>100_bases ATATTTTCACAAATCTCCCGGATAATTTTGTGTCAAGTTTTGTTTTTGGAAATAAACGTCTATAAATATAGACTGAGATG TTCCTTCAGAAGGAGGTAAT
Downstream 100 bases:
>100_bases GCGAAGCAGTCTCGTTTGTAACGGGCAATATTAACGGCAGTATTTGGAAAGCTTGCGGAATAGTATTTAGCTGTCTGATG GGCAGGCTTTTATCGCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MHTDYDTPRQTEELTESIEVLEKTATDDLNTDVDEDFDSASFELPGADLSDTDLEVVVIPPQENEFTCTSCFLVKHRLQL SSVANMCKDCAG
Sequences:
>Translated_92_residues MHTDYDTPRQTEELTESIEVLEKTATDDLNTDVDEDFDSASFELPGADLSDTDLEVVVIPPQENEFTCTSCFLVKHRLQL SSVANMCKDCAG >Mature_92_residues MHTDYDTPRQTEELTESIEVLEKTATDDLNTDVDEDFDSASFELPGADLSDTDLEVVVIPPQENEFTCTSCFLVKHRLQL SSVANMCKDCAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10232; Mature: 10232
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTDYDTPRQTEELTESIEVLEKTATDDLNTDVDEDFDSASFELPGADLSDTDLEVVVIP CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEC PQENEFTCTSCFLVKHRLQLSSVANMCKDCAG CCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHTDYDTPRQTEELTESIEVLEKTATDDLNTDVDEDFDSASFELPGADLSDTDLEVVVIP CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEC PQENEFTCTSCFLVKHRLQLSSVANMCKDCAG CCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA