| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is 28572303
Identifier: 28572303
GI number: 28572303
Start: 152632
End: 152805
Strand: Direct
Name: 28572303
Synonym: TW140
Alternate gene names: NA
Gene position: 152632-152805 (Clockwise)
Preceding gene: 28572302
Following gene: 28572304
Centisome position: 16.48
GC content: 41.95
Gene sequence:
>174_bases ATGTTTTTAGAAACTTTGCGTGAACACTGCCGTCGCTGTCGTCTGCACACTCCGCATACGATTGCAGAGGGGGTTGTAAC CGGGGTGCATAAGGATCATGTCCATCTTAAGAAGGATATTGATCACGAATTATTCTTCCCAATTTGTAATTTGATTGCAA TTGAGCTTTTGTAA
Upstream 100 bases:
>100_bases CGTGAAATTTGTTGCAATTCTTTTTAGGTCTATTAGTTGTATTGAATTTACGAATAATAATCCCCGTAAGACTGTTTCAG GTAGGTGTATTTCAATTCTT
Downstream 100 bases:
>100_bases TGGACTGTTGAAAACTGCTTGTATTCGAATTTCTTGATTGCACAATTTAATTTTTAGAGATTTTTGCATTGATATTGGTG AGATTCAAACTGAAGCGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
>57_residues MFLETLREHCRRCRLHTPHTIAEGVVTGVHKDHVHLKKDIDHELFFPICNLIAIELL
Sequences:
>Translated_57_residues MFLETLREHCRRCRLHTPHTIAEGVVTGVHKDHVHLKKDIDHELFFPICNLIAIELL >Mature_57_residues MFLETLREHCRRCRLHTPHTIAEGVVTGVHKDHVHLKKDIDHELFFPICNLIAIELL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6697; Mature: 6697
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLETLREHCRRCRLHTPHTIAEGVVTGVHKDHVHLKKDIDHELFFPICNLIAIELL CCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MFLETLREHCRRCRLHTPHTIAEGVVTGVHKDHVHLKKDIDHELFFPICNLIAIELL CCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA