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The map label for this gene is recN [H]

Identifier: 28572277

GI number: 28572277

Start: 115156

End: 116793

Strand: Reverse

Name: recN [H]

Synonym: TW111

Alternate gene names: 28572277

Gene position: 116793-115156 (Counterclockwise)

Preceding gene: 28572278

Following gene: 28572276

Centisome position: 12.61

GC content: 45.05

Gene sequence:

>1638_bases
ATGATTGAACAAATCTCTATACGCAATTTTGGAAATATAGCAAAAGCAGATATAGATTTTGGTTCCGATTTTACCGTGAT
AACCGGCGAGACCGGTGCCGGCAAGACTATGTTGCTGGGCGCATTAGAAACACTTTTGGGAAAGCCTGGAAATTCGAAGT
ATCCGCATAACCAGAGTGCGCAGGTGATTGGAATATGGCGCGTACCACGACATTTTGAGAATGTTTTACCTTGTATTGAG
GGCAAACTAACGGTGTCACGTGAAATAAGCCTATCCGGCAAATCTGTTGCAAACGTTAATGGGAAAACTGCCAATAACAG
TTATTTGGGCAAATTACGAAATAAGCTCCTTGTAGTGCATGGGCAATTTGCACAGGTGAGGCTGAAAAATCCGGCCCTGC
AAAGACAAATTCTTGATGGATACGCTGGTAATACCGATCTGCTAAAGGAATATCAATTGGCCTGGAGCGAACTCTCAAAA
ACAAATCTTGAACTTCGTAATATTCGGGATAATTTGGCGGGTCGTCGCGCGGAAGCGATAGGTCTTATACAGGCTGTAGA
GGAAATTAACGAGATCAATCCACAAATTGGTGAAGACGAAAATATAAAAAAACAGATAAACATTCTAGAGAACCACGAAC
AGCTTCTCGGGAATTTACGTGCAGCAAAACAATTACTGATCGATAATGGCATAATCGACAAAATCACCGAACTGCAGCAG
ATTTTATGTGAAATGGAGGGAATAAAACTTCAACATGCATATGGCACGGCAATTGATACAGCACTTGTGACTATGCAGGA
ATTATCAAACGAGATAACAAAACAGATTGACACCTTACCCGAGGACAGCACAGAGATATTGGATGAGATGCACAATAGGC
TGGGTGCACTGAGAAAATTACAGAAAAAATATGGTCCGACAATCGAAGATGTAATTGACTTTGCAAAAAACGCGTTAGCG
CGGAGCAGCACAATCGAAAATGACGACGTGAGGGTACAGGAATTGGAGGCGAAAAAAGAAGAATTACAGAAAAATGTTGA
ATATCTTGCCAAAAAATTATCAGAAAGGCGTGTGTCGGCAGCGCGGCTATTGGGCGATTCGGTGTCTTTAAATCTTCCAT
GTCTTGCTATGCCCGAGGCTAGATTTGAGGTCCAGGTTCTGCAAAAATCCCATGACAGTTACGGTATGGACCAAGTGGCT
ATGTTTTTACGAACAAGTTATGCGGGTGCCGCACAGCCAATTGGAACAGGGGCAAGTGGGGGGGAAATATCGCGTGTTAT
GCTTGCGATTGAAATAGCGCTTGCCAGTGTAAAAACTGTTCCTACAGTTATTTTTGATGAAATCGATTCTGGGGTCGGCG
GCGCGGCGGCTATTGAGATTGGCAGACGTTTGGCGGCCTTGGCGCGGCGGCTGCAGGTGATTGTTATAACGCACTCAGCC
CAGGTTGCGGCATTTGCCACGACTCACCTTCTGGTTACAAAAACTGGCAACCTGTCTGATGTGTGTTCCCTGTCGGGAGA
AAATCGTGTTGGTGAGATGGCTAGGTTATTGTCTGGATTGCATGATAGCGAGAGCGGATTGGAACATTCGCGGGAGTTGC
TAGCTATGGCCGCACGTGAAATGCAGGGCCGCACGTGA

Upstream 100 bases:

>100_bases
GGTGCCTGTTGTGTTTGGCCGTGTGAAAAAGGGGTGTTTTGCAGAGCATCTCGTAAAGAAATTTAACCTCCAGACCGCTT
GAGGGTCGGCGCTGTGCAGA

Downstream 100 bases:

>100_bases
AATGCAGGGCCGCACGTGAAATGCAGGGCCGCACGTATTATGTCGATCCCAATCTGTTATTTAGTCCATCTTTGGTTGGG
CTTAGGAAACTGAGGTGGGC

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MIEQISIRNFGNIAKADIDFGSDFTVITGETGAGKTMLLGALETLLGKPGNSKYPHNQSAQVIGIWRVPRHFENVLPCIE
GKLTVSREISLSGKSVANVNGKTANNSYLGKLRNKLLVVHGQFAQVRLKNPALQRQILDGYAGNTDLLKEYQLAWSELSK
TNLELRNIRDNLAGRRAEAIGLIQAVEEINEINPQIGEDENIKKQINILENHEQLLGNLRAAKQLLIDNGIIDKITELQQ
ILCEMEGIKLQHAYGTAIDTALVTMQELSNEITKQIDTLPEDSTEILDEMHNRLGALRKLQKKYGPTIEDVIDFAKNALA
RSSTIENDDVRVQELEAKKEELQKNVEYLAKKLSERRVSAARLLGDSVSLNLPCLAMPEARFEVQVLQKSHDSYGMDQVA
MFLRTSYAGAAQPIGTGASGGEISRVMLAIEIALASVKTVPTVIFDEIDSGVGGAAAIEIGRRLAALARRLQVIVITHSA
QVAAFATTHLLVTKTGNLSDVCSLSGENRVGEMARLLSGLHDSESGLEHSRELLAMAAREMQGRT

Sequences:

>Translated_545_residues
MIEQISIRNFGNIAKADIDFGSDFTVITGETGAGKTMLLGALETLLGKPGNSKYPHNQSAQVIGIWRVPRHFENVLPCIE
GKLTVSREISLSGKSVANVNGKTANNSYLGKLRNKLLVVHGQFAQVRLKNPALQRQILDGYAGNTDLLKEYQLAWSELSK
TNLELRNIRDNLAGRRAEAIGLIQAVEEINEINPQIGEDENIKKQINILENHEQLLGNLRAAKQLLIDNGIIDKITELQQ
ILCEMEGIKLQHAYGTAIDTALVTMQELSNEITKQIDTLPEDSTEILDEMHNRLGALRKLQKKYGPTIEDVIDFAKNALA
RSSTIENDDVRVQELEAKKEELQKNVEYLAKKLSERRVSAARLLGDSVSLNLPCLAMPEARFEVQVLQKSHDSYGMDQVA
MFLRTSYAGAAQPIGTGASGGEISRVMLAIEIALASVKTVPTVIFDEIDSGVGGAAAIEIGRRLAALARRLQVIVITHSA
QVAAFATTHLLVTKTGNLSDVCSLSGENRVGEMARLLSGLHDSESGLEHSRELLAMAAREMQGRT
>Mature_545_residues
MIEQISIRNFGNIAKADIDFGSDFTVITGETGAGKTMLLGALETLLGKPGNSKYPHNQSAQVIGIWRVPRHFENVLPCIE
GKLTVSREISLSGKSVANVNGKTANNSYLGKLRNKLLVVHGQFAQVRLKNPALQRQILDGYAGNTDLLKEYQLAWSELSK
TNLELRNIRDNLAGRRAEAIGLIQAVEEINEINPQIGEDENIKKQINILENHEQLLGNLRAAKQLLIDNGIIDKITELQQ
ILCEMEGIKLQHAYGTAIDTALVTMQELSNEITKQIDTLPEDSTEILDEMHNRLGALRKLQKKYGPTIEDVIDFAKNALA
RSSTIENDDVRVQELEAKKEELQKNVEYLAKKLSERRVSAARLLGDSVSLNLPCLAMPEARFEVQVLQKSHDSYGMDQVA
MFLRTSYAGAAQPIGTGASGGEISRVMLAIEIALASVKTVPTVIFDEIDSGVGGAAAIEIGRRLAALARRLQVIVITHSA
QVAAFATTHLLVTKTGNLSDVCSLSGENRVGEMARLLSGLHDSESGLEHSRELLAMAAREMQGRT

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=560, Percent_Identity=29.1071428571429, Blast_Score=200, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 59653; Mature: 59653

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQISIRNFGNIAKADIDFGSDFTVITGETGAGKTMLLGALETLLGKPGNSKYPHNQSA
CCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
QVIGIWRVPRHFENVLPCIEGKLTVSREISLSGKSVANVNGKTANNSYLGKLRNKLLVVH
CEEEEECCCHHHHHHHHHHCCCEEEEEEEECCCCCEECCCCCCCCCHHHHHHCCCEEEEE
GQFAQVRLKNPALQRQILDGYAGNTDLLKEYQLAWSELSKTNLELRNIRDNLAGRRAEAI
CCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH
GLIQAVEEINEINPQIGEDENIKKQINILENHEQLLGNLRAAKQLLIDNGIIDKITELQQ
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ILCEMEGIKLQHAYGTAIDTALVTMQELSNEITKQIDTLPEDSTEILDEMHNRLGALRKL
HHHHHCCCEEEHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
QKKYGPTIEDVIDFAKNALARSSTIENDDVRVQELEAKKEELQKNVEYLAKKLSERRVSA
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLLGDSVSLNLPCLAMPEARFEVQVLQKSHDSYGMDQVAMFLRTSYAGAAQPIGTGASG
HHHHCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
GEISRVMLAIEIALASVKTVPTVIFDEIDSGVGGAAAIEIGRRLAALARRLQVIVITHSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCC
QVAAFATTHLLVTKTGNLSDVCSLSGENRVGEMARLLSGLHDSESGLEHSRELLAMAARE
CCHHHHHEEEEEEECCCHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
MQGRT
HCCCC
>Mature Secondary Structure
MIEQISIRNFGNIAKADIDFGSDFTVITGETGAGKTMLLGALETLLGKPGNSKYPHNQSA
CCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
QVIGIWRVPRHFENVLPCIEGKLTVSREISLSGKSVANVNGKTANNSYLGKLRNKLLVVH
CEEEEECCCHHHHHHHHHHCCCEEEEEEEECCCCCEECCCCCCCCCHHHHHHCCCEEEEE
GQFAQVRLKNPALQRQILDGYAGNTDLLKEYQLAWSELSKTNLELRNIRDNLAGRRAEAI
CCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHH
GLIQAVEEINEINPQIGEDENIKKQINILENHEQLLGNLRAAKQLLIDNGIIDKITELQQ
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ILCEMEGIKLQHAYGTAIDTALVTMQELSNEITKQIDTLPEDSTEILDEMHNRLGALRKL
HHHHHCCCEEEHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
QKKYGPTIEDVIDFAKNALARSSTIENDDVRVQELEAKKEELQKNVEYLAKKLSERRVSA
HHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLLGDSVSLNLPCLAMPEARFEVQVLQKSHDSYGMDQVAMFLRTSYAGAAQPIGTGASG
HHHHCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
GEISRVMLAIEIALASVKTVPTVIFDEIDSGVGGAAAIEIGRRLAALARRLQVIVITHSA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCC
QVAAFATTHLLVTKTGNLSDVCSLSGENRVGEMARLLSGLHDSESGLEHSRELLAMAARE
CCHHHHHEEEEEEECCCHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
MQGRT
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]