| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is guaA
Identifier: 28572257
GI number: 28572257
Start: 87199
End: 88710
Strand: Direct
Name: guaA
Synonym: TW089
Alternate gene names: 28572257
Gene position: 87199-88710 (Clockwise)
Preceding gene: 28572256
Following gene: 28572258
Centisome position: 9.42
GC content: 46.36
Gene sequence:
>1512_bases ATGAGACCTGTTCTTGTCGTTGATTTTGGCTCTCAATATTCGCAGCTTGTAGTCCGTGCGATAAGAGAGTGCGGGTATTA TGCAGAGTTTGCGTCCCCGAGTATTTCTGCTGCTGAATGTCTTGCCTTGTCCCCGATTGCCATATTTCTCTCTGGAGGGC CTGCTAGTGCATACAAAGATAATGCCCCCAAGCTTGACGAAGAGATTTTTAATTGTGGCATTCCCATTTTTGGCATTTGC TACGGCTTTCAACTGCTTGCACAGGCATTCGGTGGATCTGTCAAAAAAGCAAATGCTCCGGAATACGGCCCTGCGGATAT AACAATTGTCAACAAGGCGTTTTTTTCTGGCCAACCCGACCGCCAGACAGTGTGGATGAGCCATGGTGATAGTGTTATAC GCGCTCCCAAAAATTTTTGCATTCTTTCAACTTCTCAGGATGCTGTTCTTTCATTTTGCAACCGTGATAGAACAATTGCT GGCGTGCAATGGCACCCGGAAGTAAAGCACAGCCGGTTTGGTAAACACACAATAAAAGCCTTTTTATCAAGTTTTGCCGC GCCAAACTGGGATCCAGAACAGACAATTTGTGGGACAGTTGACAGTATCCGCAAAACTGTTGGTTGTAAGAGGGTTTTGT GTGCTCTTAGCGGAGGAGTTGACTCTGTCGTTGCCGCAACACTCACACACCGTGCGATAGGCGATAGGCTGCGATGTGTT TTTGTTGATCATGGTCTTCTTCGGTTGAATGAGAGGGAGCAGGTTGAGGAGTATTGTTCATCTCTTGGTCTTAATGTGTC TACTTATGATGCCTCAGATTGTTTTTTGAGCGCCCTTTCAGGGATACGTGATTCTGAGCAAAAGCGTAAGGTAATTGGTC GCGAGTTTATTGCCTGTTTTTCAAAATTGCAAGAGCGATTTGATATAAAGCCGCACTTTCTCTTACAGGGCACGCTTTAT CCGGATCTCGTTGAATCCGGAGCAACCCCGGGTGGCGCGACTATAAAAAGTCATCATAATGTTGGTGGCTTGTCGGATAA TCTTGGTTTTGAATTATTAGAACCGCTGAAGTATCTTTTCAAGGATGAAGTGCGAAAAATTGGCCTTCAACTCGGTATAC CTAAGCACATAGTGCACAGACAGCCCTTCCCTGGCCCTGGCCTTGCTATAAGAATAATTGGTGAGGTTACAAACAAGAAG CTGTCTATTCTGCGTGCGGCCGATGCAATTGTCAGGCATGAGTTGCGAGACTGGACTGATATCTGGCAGTGCCCAGTTAT CTTACTATCTGACGTGCAATCAGTAGGCGTTCGCGGAGATAGTAGATCATGCGGCTTTCCGATTGTTATCCGGCCCGTTT CGTCTGATGATGCAATGACCGCGGATTGGTACCGATTACCATACGATGTTCTTGCACGAATTTCTGGTCGTATAACAAAC GAAATTCCTGAAATCGTGCGTGTTGTTCTTGATATCACACCCAAGCCCCCAGCAACGATAGAGTGGGAGTAG
Upstream 100 bases:
>100_bases CACTATTTATCGTTATCGCTCTCGGCGGAGTTGTGCCTCTTATGAGTTTTGTGGTCGAGCGGTATGTTTACAAGAAACTT TCAAAACGGTTTGTGTCGAC
Downstream 100 bases:
>100_bases GGTATCTTACTGCTTGGACTTTGCGTCGATGCACTACTGAGCTTTGAGGCTACCGGGTTTACGGGGTATTCTAGACGCTG TGCGCTCTAGAGAGCGCAGC
Product: GMP synthase
Products: NA
Alternate protein names: GMP synthetase; Glutamine amidotransferase
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MRPVLVVDFGSQYSQLVVRAIRECGYYAEFASPSISAAECLALSPIAIFLSGGPASAYKDNAPKLDEEIFNCGIPIFGIC YGFQLLAQAFGGSVKKANAPEYGPADITIVNKAFFSGQPDRQTVWMSHGDSVIRAPKNFCILSTSQDAVLSFCNRDRTIA GVQWHPEVKHSRFGKHTIKAFLSSFAAPNWDPEQTICGTVDSIRKTVGCKRVLCALSGGVDSVVAATLTHRAIGDRLRCV FVDHGLLRLNEREQVEEYCSSLGLNVSTYDASDCFLSALSGIRDSEQKRKVIGREFIACFSKLQERFDIKPHFLLQGTLY PDLVESGATPGGATIKSHHNVGGLSDNLGFELLEPLKYLFKDEVRKIGLQLGIPKHIVHRQPFPGPGLAIRIIGEVTNKK LSILRAADAIVRHELRDWTDIWQCPVILLSDVQSVGVRGDSRSCGFPIVIRPVSSDDAMTADWYRLPYDVLARISGRITN EIPEIVRVVLDITPKPPATIEWE
Sequences:
>Translated_503_residues MRPVLVVDFGSQYSQLVVRAIRECGYYAEFASPSISAAECLALSPIAIFLSGGPASAYKDNAPKLDEEIFNCGIPIFGIC YGFQLLAQAFGGSVKKANAPEYGPADITIVNKAFFSGQPDRQTVWMSHGDSVIRAPKNFCILSTSQDAVLSFCNRDRTIA GVQWHPEVKHSRFGKHTIKAFLSSFAAPNWDPEQTICGTVDSIRKTVGCKRVLCALSGGVDSVVAATLTHRAIGDRLRCV FVDHGLLRLNEREQVEEYCSSLGLNVSTYDASDCFLSALSGIRDSEQKRKVIGREFIACFSKLQERFDIKPHFLLQGTLY PDLVESGATPGGATIKSHHNVGGLSDNLGFELLEPLKYLFKDEVRKIGLQLGIPKHIVHRQPFPGPGLAIRIIGEVTNKK LSILRAADAIVRHELRDWTDIWQCPVILLSDVQSVGVRGDSRSCGFPIVIRPVSSDDAMTADWYRLPYDVLARISGRITN EIPEIVRVVLDITPKPPATIEWE >Mature_503_residues MRPVLVVDFGSQYSQLVVRAIRECGYYAEFASPSISAAECLALSPIAIFLSGGPASAYKDNAPKLDEEIFNCGIPIFGIC YGFQLLAQAFGGSVKKANAPEYGPADITIVNKAFFSGQPDRQTVWMSHGDSVIRAPKNFCILSTSQDAVLSFCNRDRTIA GVQWHPEVKHSRFGKHTIKAFLSSFAAPNWDPEQTICGTVDSIRKTVGCKRVLCALSGGVDSVVAATLTHRAIGDRLRCV FVDHGLLRLNEREQVEEYCSSLGLNVSTYDASDCFLSALSGIRDSEQKRKVIGREFIACFSKLQERFDIKPHFLLQGTLY PDLVESGATPGGATIKSHHNVGGLSDNLGFELLEPLKYLFKDEVRKIGLQLGIPKHIVHRQPFPGPGLAIRIIGEVTNKK LSILRAADAIVRHELRDWTDIWQCPVILLSDVQSVGVRGDSRSCGFPIVIRPVSSDDAMTADWYRLPYDVLARISGRITN EIPEIVRVVLDITPKPPATIEWE
Specific function: Catalyzes the synthesis of GMP from XMP
COG id: COG0519
COG function: function code F; GMP synthase, PP-ATPase domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GMP-binding domain
Homologues:
Organism=Homo sapiens, GI4504035, Length=555, Percent_Identity=32.4324324324324, Blast_Score=256, Evalue=3e-68, Organism=Escherichia coli, GI1788854, Length=518, Percent_Identity=46.1389961389961, Blast_Score=444, Evalue=1e-126, Organism=Caenorhabditis elegans, GI71992717, Length=419, Percent_Identity=38.1861575178998, Blast_Score=260, Evalue=1e-69, Organism=Caenorhabditis elegans, GI71992710, Length=419, Percent_Identity=38.1861575178998, Blast_Score=260, Evalue=2e-69, Organism=Caenorhabditis elegans, GI133901714, Length=419, Percent_Identity=38.1861575178998, Blast_Score=259, Evalue=2e-69, Organism=Saccharomyces cerevisiae, GI6323873, Length=517, Percent_Identity=45.2611218568665, Blast_Score=426, Evalue=1e-120, Organism=Drosophila melanogaster, GI281365319, Length=538, Percent_Identity=31.7843866171004, Blast_Score=236, Evalue=4e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GUAA_TROW8 (Q83ID3)
Other databases:
- EMBL: BX251410 - RefSeq: NP_789037.1 - ProteinModelPortal: Q83ID3 - SMR: Q83ID3 - STRING: Q83ID3 - GeneID: 1064337 - GenomeReviews: BX072543_GR - KEGG: tws:TW089 - eggNOG: COG0519 - HOGENOM: HBG391775 - OMA: PSTIEPC - ProtClustDB: PRK00074 - BioCyc: TWHI218496:TW0082-MONOMER - HAMAP: MF_00344 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR001674 - InterPro: IPR004739 - InterPro: IPR022955 - InterPro: IPR022310 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR00099 - PRINTS: PR00096 - TIGRFAMs: TIGR00884 - TIGRFAMs: TIGR00888
Pfam domain/function: PF00117 GATase; PF00958 GMP_synt_C; PF02540 NAD_synthase
EC number: =6.3.5.2
Molecular weight: Translated: 55377; Mature: 55377
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 80-80 ACT_SITE 165-165 ACT_SITE 167-167
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPVLVVDFGSQYSQLVVRAIRECGYYAEFASPSISAAECLALSPIAIFLSGGPASAYKD CCCEEEEECCCHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHCCEEEEEECCCCCCCCC NAPKLDEEIFNCGIPIFGICYGFQLLAQAFGGSVKKANAPEYGPADITIVNKAFFSGQPD CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHCCCCC RQTVWMSHGDSVIRAPKNFCILSTSQDAVLSFCNRDRTIAGVQWHPEVKHSRFGKHTIKA CCEEEECCCCHHEECCCCEEEEECCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHH FLSSFAAPNWDPEQTICGTVDSIRKTVGCKRVLCALSGGVDSVVAATLTHRAIGDRLRCV HHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEE FVDHGLLRLNEREQVEEYCSSLGLNVSTYDASDCFLSALSGIRDSEQKRKVIGREFIACF EECCCHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH SKLQERFDIKPHFLLQGTLYPDLVESGATPGGATIKSHHNVGGLSDNLGFELLEPLKYLF HHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH KDEVRKIGLQLGIPKHIVHRQPFPGPGLAIRIIGEVTNKKLSILRAADAIVRHELRDWTD HHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHH IWQCPVILLSDVQSVGVRGDSRSCGFPIVIRPVSSDDAMTADWYRLPYDVLARISGRITN HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHH EIPEIVRVVLDITPKPPATIEWE HHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRPVLVVDFGSQYSQLVVRAIRECGYYAEFASPSISAAECLALSPIAIFLSGGPASAYKD CCCEEEEECCCHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHCCEEEEEECCCCCCCCC NAPKLDEEIFNCGIPIFGICYGFQLLAQAFGGSVKKANAPEYGPADITIVNKAFFSGQPD CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHCCCCC RQTVWMSHGDSVIRAPKNFCILSTSQDAVLSFCNRDRTIAGVQWHPEVKHSRFGKHTIKA CCEEEECCCCHHEECCCCEEEEECCHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHH FLSSFAAPNWDPEQTICGTVDSIRKTVGCKRVLCALSGGVDSVVAATLTHRAIGDRLRCV HHHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEE FVDHGLLRLNEREQVEEYCSSLGLNVSTYDASDCFLSALSGIRDSEQKRKVIGREFIACF EECCCHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH SKLQERFDIKPHFLLQGTLYPDLVESGATPGGATIKSHHNVGGLSDNLGFELLEPLKYLF HHHHHHHCCCCCEEEECCCCHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHH KDEVRKIGLQLGIPKHIVHRQPFPGPGLAIRIIGEVTNKKLSILRAADAIVRHELRDWTD HHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHH IWQCPVILLSDVQSVGVRGDSRSCGFPIVIRPVSSDDAMTADWYRLPYDVLARISGRITN HHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHH EIPEIVRVVLDITPKPPATIEWE HHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12606174