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The map label for this gene is sopA [C]

Identifier: 28572229

GI number: 28572229

Start: 47971

End: 48753

Strand: Direct

Name: sopA [C]

Synonym: TW059

Alternate gene names: 28572229

Gene position: 47971-48753 (Clockwise)

Preceding gene: 28572228

Following gene: 28572230

Centisome position: 5.18

GC content: 44.19

Gene sequence:

>783_bases
ATGACTAAAAAATCCGCTAGGACGGTTGCTGTCTGTAACCAAAAGGGTGGAGTTGGTAAAACAACAACAACCATAAATCT
TGCTGCATGCTTGGCCGAACGCGGAATGAGAGTTTTAACGGTCGACCTAGATCCACAGGGTGCCCTAACTGCTGGCTTCG
GAATTTCCAATTTTGAATACACGGTATACGATCTTCTGCTCGGCCGTAATCGCAATGCTGTATTGATACAAACCTCCCTC
AAAGGCGTTGATGTCCTGCCAGCAAATATAGACTTGTCTGCAGCTGAAGTCTATCTTGTATCGGAAGTTGCCAGAGAGCA
AATACTTGCCAAAGAGCTTGAGTCATTCTCCTCCGATTATGATGTGATACTAATCGACTGCCAGCCCTCACTCGGTCTTC
TTACCATAAATGCACTTACTGCAAGTCATGGTTTACTTATTCCCCTTGAGTGTGAGTATTTCGCCATGCGAGGATTGGCT
CTATTACTCGAAACAGTTCGCAAAATCCAAGATCGATTAAATACTGCGCTAAAGGTTGACGGAATTATTGCAACTATGTT
CGATATGAGAACTTTGCATGCCAGAGAGGTCTTAGAGAGTGTGAAAAAGGCCTTTCCCGGGTTACTGCTAACAACTGTTA
TAAATAGGACAATAAAATTTCCAGACTCCAGTATCGCTGGCATGCCGGTTACCGTTTTCGCCCCAAATCATCAAGCATCG
AAAAATTATCGCGACCTCACGCACGAACTTGTACATCGTGGTGTTTTTACCTTACCAAGCTAA

Upstream 100 bases:

>100_bases
CCGCACGGTCGGACCAAATTGCCACAGGTGGGGAATACGATGACGATGAATCCGGTGATCTTATTACTCCGGTTGATAGG
GATGGCTTGGATTTCTGAAT

Downstream 100 bases:

>100_bases
TTGTCTTCTCTGCATTGATTCGCTCTTATTATTATCTGCATAGCGTAGCTGTGTAGGTCGTACACTTTAATCGGTGTACG
TTCATATCATTGGTGCTGGA

Product: sporulation/chromosome partition protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MTKKSARTVAVCNQKGGVGKTTTTINLAACLAERGMRVLTVDLDPQGALTAGFGISNFEYTVYDLLLGRNRNAVLIQTSL
KGVDVLPANIDLSAAEVYLVSEVAREQILAKELESFSSDYDVILIDCQPSLGLLTINALTASHGLLIPLECEYFAMRGLA
LLLETVRKIQDRLNTALKVDGIIATMFDMRTLHAREVLESVKKAFPGLLLTTVINRTIKFPDSSIAGMPVTVFAPNHQAS
KNYRDLTHELVHRGVFTLPS

Sequences:

>Translated_260_residues
MTKKSARTVAVCNQKGGVGKTTTTINLAACLAERGMRVLTVDLDPQGALTAGFGISNFEYTVYDLLLGRNRNAVLIQTSL
KGVDVLPANIDLSAAEVYLVSEVAREQILAKELESFSSDYDVILIDCQPSLGLLTINALTASHGLLIPLECEYFAMRGLA
LLLETVRKIQDRLNTALKVDGIIATMFDMRTLHAREVLESVKKAFPGLLLTTVINRTIKFPDSSIAGMPVTVFAPNHQAS
KNYRDLTHELVHRGVFTLPS
>Mature_259_residues
TKKSARTVAVCNQKGGVGKTTTTINLAACLAERGMRVLTVDLDPQGALTAGFGISNFEYTVYDLLLGRNRNAVLIQTSLK
GVDVLPANIDLSAAEVYLVSEVAREQILAKELESFSSDYDVILIDCQPSLGLLTINALTASHGLLIPLECEYFAMRGLAL
LLETVRKIQDRLNTALKVDGIIATMFDMRTLHAREVLESVKKAFPGLLLTTVINRTIKFPDSSIAGMPVTVFAPNHQASK
NYRDLTHELVHRGVFTLPS

Specific function: May play a role in septum formation [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28347; Mature: 28216

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKSARTVAVCNQKGGVGKTTTTINLAACLAERGMRVLTVDLDPQGALTAGFGISNFEY
CCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCHH
TVYDLLLGRNRNAVLIQTSLKGVDVLPANIDLSAAEVYLVSEVAREQILAKELESFSSDY
HEEEHHHCCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
DVILIDCQPSLGLLTINALTASHGLLIPLECEYFAMRGLALLLETVRKIQDRLNTALKVD
CEEEEECCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEHH
GIIATMFDMRTLHAREVLESVKKAFPGLLLTTVINRTIKFPDSSIAGMPVTVFAPNHQAS
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC
KNYRDLTHELVHRGVFTLPS
CHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TKKSARTVAVCNQKGGVGKTTTTINLAACLAERGMRVLTVDLDPQGALTAGFGISNFEY
CCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCEEECCCCCCCHH
TVYDLLLGRNRNAVLIQTSLKGVDVLPANIDLSAAEVYLVSEVAREQILAKELESFSSDY
HEEEHHHCCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
DVILIDCQPSLGLLTINALTASHGLLIPLECEYFAMRGLALLLETVRKIQDRLNTALKVD
CEEEEECCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEHH
GIIATMFDMRTLHAREVLESVKKAFPGLLLTTVINRTIKFPDSSIAGMPVTVFAPNHQAS
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCC
KNYRDLTHELVHRGVFTLPS
CHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]