Definition Tropheryma whipplei TW08/27, complete genome.
Accession NC_004551
Length 925,938

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The map label for this gene is 28572228

Identifier: 28572228

GI number: 28572228

Start: 47741

End: 47968

Strand: Direct

Name: 28572228

Synonym: TW058

Alternate gene names: NA

Gene position: 47741-47968 (Clockwise)

Preceding gene: 28572227

Following gene: 28572229

Centisome position: 5.16

GC content: 50.44

Gene sequence:

>228_bases
ATGCGTTATGTTAATTTGACATGTGGATACACGGGTTGGTTTTGGATTGCTGCGGTTAACAAGACCGCTGATGGTGATCT
GAATGTTCTAGAGCTATACCCCTCCCCAGGCCCGGGGGCGCTTGCATTCACCGCACGGTCGGACCAAATTGCCACAGGTG
GGGAATACGATGACGATGAATCCGGTGATCTTATTACTCCGGTTGATAGGGATGGCTTGGATTTCTGA

Upstream 100 bases:

>100_bases
TGACTCGCAAAGAGAGCGCATAAAGGATCTCATAAGTGATTCTTGTGGGTCAGTAGGTGAATTTGTTGAGTGTGTTCCAA
TATCTAATGGCGTTTATGAA

Downstream 100 bases:

>100_bases
ATATGACTAAAAAATCCGCTAGGACGGTTGCTGTCTGTAACCAAAAGGGTGGAGTTGGTAAAACAACAACAACCATAAAT
CTTGCTGCATGCTTGGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MRYVNLTCGYTGWFWIAAVNKTADGDLNVLELYPSPGPGALAFTARSDQIATGGEYDDDESGDLITPVDRDGLDF

Sequences:

>Translated_75_residues
MRYVNLTCGYTGWFWIAAVNKTADGDLNVLELYPSPGPGALAFTARSDQIATGGEYDDDESGDLITPVDRDGLDF
>Mature_75_residues
MRYVNLTCGYTGWFWIAAVNKTADGDLNVLELYPSPGPGALAFTARSDQIATGGEYDDDESGDLITPVDRDGLDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8120; Mature: 8120

Theoretical pI: Translated: 3.66; Mature: 3.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYVNLTCGYTGWFWIAAVNKTADGDLNVLELYPSPGPGALAFTARSDQIATGGEYDDDE
CEEEEEEECCCCEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCEECCCCCCCCC
SGDLITPVDRDGLDF
CCCEECCCCCCCCCC
>Mature Secondary Structure
MRYVNLTCGYTGWFWIAAVNKTADGDLNVLELYPSPGPGALAFTARSDQIATGGEYDDDE
CEEEEEEECCCCEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCEECCCCCCCCC
SGDLITPVDRDGLDF
CCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA