Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28379447

Identifier: 28379447

GI number: 28379447

Start: 2686054

End: 2686578

Strand: Direct

Name: 28379447

Synonym: lp_3019

Alternate gene names: NA

Gene position: 2686054-2686578 (Clockwise)

Preceding gene: 28379445

Following gene: 28379448

Centisome position: 81.19

GC content: 44.19

Gene sequence:

>525_bases
ATGAAAAAAATTCTGATTCCGATTATCACTGTTCTTATTATCGGTACCATTGTTGGTCTCAGCACCCTACACCGCACCCC
GCGAGCCACCACAACTACGGTTCACAAATCACGCGTTATCCAACAACCACAACCGATTACCGAAACGACCATTGCTAAAC
AGCCTGCTTTAAAATACAGCTGCATTATTTATTACGCGATCAAGCACTTAAAGATTCAGCGTTGGCAAGAAGTTAGTGAT
TTCAGCTTGGGTTGGCAGGTCGAAATTTACACTGACCAGGGGCAAACTAAGTATCTGGTTTGGTCTGATAAACACATTAA
GGCCGATGCCAAGCAACTCCAGCCGAACTGGTTCACACTCAAAAATGACCAGGTCACTTATGACAGCTTTGGTGTTCATA
CTTTTAAAAAAGATCTGACTGCCACAGTCAGTATGAGGACCATTCTAGCTCAGATCAAGCGTGACCACGCGACGAAAACC
GTTCGCCACATGCCAACTAACCTTGTAATCAAAGATCATCGTTGA

Upstream 100 bases:

>100_bases
TTTTAAATAGTAATCATTACGTTTTAAAGAATAGCAATAAATTTCATTCTTGTAAATAGTAATATTTACGTTTTACAATT
TTATTCGTTAGGAGTTTCTT

Downstream 100 bases:

>100_bases
ACACGCTTTAAGTTAACTTTTCCATTCTCAGGAGGATTGGAAAAGTTTTTTTATCCACGTGTTTTCCGACCCATTTACCG
TATTTAGTTAGTGTCTACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKKILIPIITVLIIGTIVGLSTLHRTPRATTTTVHKSRVIQQPQPITETTIAKQPALKYSCIIYYAIKHLKIQRWQEVSD
FSLGWQVEIYTDQGQTKYLVWSDKHIKADAKQLQPNWFTLKNDQVTYDSFGVHTFKKDLTATVSMRTILAQIKRDHATKT
VRHMPTNLVIKDHR

Sequences:

>Translated_174_residues
MKKILIPIITVLIIGTIVGLSTLHRTPRATTTTVHKSRVIQQPQPITETTIAKQPALKYSCIIYYAIKHLKIQRWQEVSD
FSLGWQVEIYTDQGQTKYLVWSDKHIKADAKQLQPNWFTLKNDQVTYDSFGVHTFKKDLTATVSMRTILAQIKRDHATKT
VRHMPTNLVIKDHR
>Mature_174_residues
MKKILIPIITVLIIGTIVGLSTLHRTPRATTTTVHKSRVIQQPQPITETTIAKQPALKYSCIIYYAIKHLKIQRWQEVSD
FSLGWQVEIYTDQGQTKYLVWSDKHIKADAKQLQPNWFTLKNDQVTYDSFGVHTFKKDLTATVSMRTILAQIKRDHATKT
VRHMPTNLVIKDHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20121; Mature: 20121

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILIPIITVLIIGTIVGLSTLHRTPRATTTTVHKSRVIQQPQPITETTIAKQPALKYS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCHHH
CIIYYAIKHLKIQRWQEVSDFSLGWQVEIYTDQGQTKYLVWSDKHIKADAKQLQPNWFTL
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHCCCCEEEE
KNDQVTYDSFGVHTFKKDLTATVSMRTILAQIKRDHATKTVRHMPTNLVIKDHR
ECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure
MKKILIPIITVLIIGTIVGLSTLHRTPRATTTTVHKSRVIQQPQPITETTIAKQPALKYS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCCCHHH
CIIYYAIKHLKIQRWQEVSDFSLGWQVEIYTDQGQTKYLVWSDKHIKADAKQLQPNWFTL
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHCCCCEEEE
KNDQVTYDSFGVHTFKKDLTATVSMRTILAQIKRDHATKTVRHMPTNLVIKDHR
ECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA