Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28379176

Identifier: 28379176

GI number: 28379176

Start: 2370939

End: 2371334

Strand: Direct

Name: 28379176

Synonym: lp_2667

Alternate gene names: NA

Gene position: 2370939-2371334 (Clockwise)

Preceding gene: 28379172

Following gene: 28379179

Centisome position: 71.67

GC content: 42.42

Gene sequence:

>396_bases
ATGCAAATACAAATGAAAAGTAGGTTATGTAGTATGTATGAAATGACCAAAAAGCTCCGTGTCGGTGATGATGTTAAAGA
AATGATCCCACAAGCAGTGATTGCCGGACTTTGGGACCGTCTCAAAGCGATGCGCAAAGAGAAATTATTGATTGATAGCA
CGATGGCCATCATGTTCAGTGACGACTACGAAGACAATAAAATTTTCTTCATGACACTTCAAAAATCCGGCTCATTCGCC
AATGAATATGAAATGGCCTATGATGGGCCCAAAGACTTCCTCGGCCATGGGACGATTGTTATTATCAAAGACCGTCCCCG
TACGATTCAAATGAGCATCTCGGACGCTAATAAAGCTGAAGACACCAATGACGATGCGACTGATGAGCAAAAGTAG

Upstream 100 bases:

>100_bases
TAAATAGGTTACATTAATTATACCTAGATTAACTAGTCTTGTAAACTAGATGACATTGTAAATCACATTAATTTCTGAAT
ATGGTATCATTTATGGGTTA

Downstream 100 bases:

>100_bases
GCTCGCACTTTAAATCACATCATGATTGCTAATAAGCTGCTCAGGTGGTGACCGATGTTCACTGACTACCCCGAATTTGT
ACCTGGTTATGCTACAGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MQIQMKSRLCSMYEMTKKLRVGDDVKEMIPQAVIAGLWDRLKAMRKEKLLIDSTMAIMFSDDYEDNKIFFMTLQKSGSFA
NEYEMAYDGPKDFLGHGTIVIIKDRPRTIQMSISDANKAEDTNDDATDEQK

Sequences:

>Translated_131_residues
MQIQMKSRLCSMYEMTKKLRVGDDVKEMIPQAVIAGLWDRLKAMRKEKLLIDSTMAIMFSDDYEDNKIFFMTLQKSGSFA
NEYEMAYDGPKDFLGHGTIVIIKDRPRTIQMSISDANKAEDTNDDATDEQK
>Mature_131_residues
MQIQMKSRLCSMYEMTKKLRVGDDVKEMIPQAVIAGLWDRLKAMRKEKLLIDSTMAIMFSDDYEDNKIFFMTLQKSGSFA
NEYEMAYDGPKDFLGHGTIVIIKDRPRTIQMSISDANKAEDTNDDATDEQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15089; Mature: 15089

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
8.4 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
8.4 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIQMKSRLCSMYEMTKKLRVGDDVKEMIPQAVIAGLWDRLKAMRKEKLLIDSTMAIMFS
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
DDYEDNKIFFMTLQKSGSFANEYEMAYDGPKDFLGHGTIVIIKDRPRTIQMSISDANKAE
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCEEEEEECCCCCCC
DTNDDATDEQK
CCCCCCCCCCC
>Mature Secondary Structure
MQIQMKSRLCSMYEMTKKLRVGDDVKEMIPQAVIAGLWDRLKAMRKEKLLIDSTMAIMFS
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
DDYEDNKIFFMTLQKSGSFANEYEMAYDGPKDFLGHGTIVIIKDRPRTIQMSISDANKAE
CCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCEEEECCCCCEEEEEECCCCCCC
DTNDDATDEQK
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA