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The map label for this gene is 28379172

Identifier: 28379172

GI number: 28379172

Start: 2367753

End: 2368532

Strand: Direct

Name: 28379172

Synonym: lp_2663

Alternate gene names: NA

Gene position: 2367753-2368532 (Clockwise)

Preceding gene: 28379171

Following gene: 28379176

Centisome position: 71.57

GC content: 48.46

Gene sequence:

>780_bases
GTGGATAACTTGATCAAGAATAACGGCATCGTCTTGCTGGTCATCATTGTTTTACCCGGACTATTCGCTTGGTTACTGAC
GATTATCAACCGACAAACCAAAGCGAATCTGGTCAACCACTACGGTATTAACAGTCAAGTCTACTGTGGTTTTCTGGGCA
TCATCATCCACGAGCTTAGCCATCTAATCCTCGCACTGATTTTTCGCCACGGCATCCAATCGGTCCGGCTGCTCAAACGC
CCTCACCTCCATCCTGAAGATGAGTCGGCGGATGATCTGGCACTAGGCTATGTTAACCATACTTGGAATCGGCACAGCCG
GTATCAAGTCATTGGTAACCTGTTCATTGGTGTCGCCCCCATCTTCGGATGCACAGCGGCACTCCTTGGACTAGACTGGC
TACTCGCTCCTGGCCTATTTCAAGCCATCTTCAAATTAGCTGATACACCCGAACAACCACAATGGGCTGCAAGTTTTCAC
GCGTTAACCAGTACGCCAACGAGTTGGTGGCAACTATTAATGTTGCTCTTTCTAACCCTCGTCATTGTGATTGGTGGCTT
CGATCTAAGTCCCGCTGATTATCAGAATAGTGCGATCGGGTTGTATAGCACCATCGTCATCATTATCGTGCTGACTACCT
TACTGACGTTCATCGGTATCACCGGTTGGATCCATACGTTAGTTACTTGGGGACTAATGGTCGCCATTATCTTGGGCTAC
TCACTACTCGTGTCCCTACTAGTCATGTTGGTAACCCATCTTCTGACCAACCGTGCCTGA

Upstream 100 bases:

>100_bases
CTCGTATCTTCGGGTAAAATCGGGCGTTCAATTGAAATCGACGCTGATGATCTACGCAAGCTCGTGCACGGCACTTTTGG
TCCAATAACGGAGTAGCCTC

Downstream 100 bases:

>100_bases
TTTAGATTGCCAGCCTTAAAACCAGAATAAGGGCTAAAAAGGCCATCACAAGAATTCACGATACATTCTTGTGATGGCCT
TTTTCGTTAGCCAATATAAA

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MDNLIKNNGIVLLVIIVLPGLFAWLLTIINRQTKANLVNHYGINSQVYCGFLGIIIHELSHLILALIFRHGIQSVRLLKR
PHLHPEDESADDLALGYVNHTWNRHSRYQVIGNLFIGVAPIFGCTAALLGLDWLLAPGLFQAIFKLADTPEQPQWAASFH
ALTSTPTSWWQLLMLLFLTLVIVIGGFDLSPADYQNSAIGLYSTIVIIIVLTTLLTFIGITGWIHTLVTWGLMVAIILGY
SLLVSLLVMLVTHLLTNRA

Sequences:

>Translated_259_residues
MDNLIKNNGIVLLVIIVLPGLFAWLLTIINRQTKANLVNHYGINSQVYCGFLGIIIHELSHLILALIFRHGIQSVRLLKR
PHLHPEDESADDLALGYVNHTWNRHSRYQVIGNLFIGVAPIFGCTAALLGLDWLLAPGLFQAIFKLADTPEQPQWAASFH
ALTSTPTSWWQLLMLLFLTLVIVIGGFDLSPADYQNSAIGLYSTIVIIIVLTTLLTFIGITGWIHTLVTWGLMVAIILGY
SLLVSLLVMLVTHLLTNRA
>Mature_259_residues
MDNLIKNNGIVLLVIIVLPGLFAWLLTIINRQTKANLVNHYGINSQVYCGFLGIIIHELSHLILALIFRHGIQSVRLLKR
PHLHPEDESADDLALGYVNHTWNRHSRYQVIGNLFIGVAPIFGCTAALLGLDWLLAPGLFQAIFKLADTPEQPQWAASFH
ALTSTPTSWWQLLMLLFLTLVIVIGGFDLSPADYQNSAIGLYSTIVIIIVLTTLLTFIGITGWIHTLVTWGLMVAIILGY
SLLVSLLVMLVTHLLTNRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28762; Mature: 28762

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDNLIKNNGIVLLVIIVLPGLFAWLLTIINRQTKANLVNHYGINSQVYCGFLGIIIHELS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
HLILALIFRHGIQSVRLLKRPHLHPEDESADDLALGYVNHTWNRHSRYQVIGNLFIGVAP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IFGCTAALLGLDWLLAPGLFQAIFKLADTPEQPQWAASFHALTSTPTSWWQLLMLLFLTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
VIVIGGFDLSPADYQNSAIGLYSTIVIIIVLTTLLTFIGITGWIHTLVTWGLMVAIILGY
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLVSLLVMLVTHLLTNRA
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA