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The map label for this gene is 28378263

Identifier: 28378263

GI number: 28378263

Start: 1421998

End: 1422507

Strand: Direct

Name: 28378263

Synonym: lp_1556

Alternate gene names: NA

Gene position: 1421998-1422507 (Clockwise)

Preceding gene: 28378262

Following gene: 28378264

Centisome position: 42.98

GC content: 41.96

Gene sequence:

>510_bases
ATGAAAACTAATAATGCGTGGCAACAAGATTCTGAATACGTGGCGATCGTCGAAGATTTATTAGCACAGCCGGCCGTTCA
GCGGCTTGCTGAGTTTACACAGCACCACCATTCAAATCGATTGGATCATTCGATTGCAGTTTCATATGATAGTTATGTTT
TAGCGAAGAAATGGCATTTAAATACGACGGCAGTGGCGCGTGGTGGATTATTGCATGATTTGTTTTATTATGACTGGCGT
GAAACCAAGTTTGATCTCGGCTCGCACGCATTTATTCATCCGCGGGTAGCGTTACGTAACGCTGAAAAGTTAACGAAATT
AACGCCGATGGAAAAAGATATCATTTTGAAGCATATGTTTGGTGCAACTTTAGCTGTGCCTAAATATCGTGAAAGTTTGC
TCGTCTCTTTAGTTGATGATTATGAAGCAGAACATGAATTTTTTGGACCATTACGTATGAAAGTGGCCAAACAACTAGAT
CGGTTCCGAGGCAAGGTCTCCGCCGGTTAA

Upstream 100 bases:

>100_bases
CTTACAATTAGTAAGAAAATGCTAAAATCCAGGTAAAATACTTTCAAAATGACTGGCTTTTTAGTAGAATAGCCGTAGAT
ATTAGCAAAGGGAGCTTTAG

Downstream 100 bases:

>100_bases
TTCAATAATTGGGGGTCATTGCATGTCAGAAATGCTAGCTGACACGGTAACAGAATCCAACGTGGATTTCGAACTGTGTC
CAAAATTTGAAAAGACGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: HD Superfamily Hydrolase; Metal-Dependent Phosphohydrolase; HD Domain-Containing Protein; HD Family Hydrolase; HD Superfamily Metal-Dependent Phosphohydrolase; Hydrolase; Phosphohydrolase; Domain HDIG Containing Protein; HD Domain Protein; HAD Superfamily Hydrolase; Hydrolase Of HAD Superfamily

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKTNNAWQQDSEYVAIVEDLLAQPAVQRLAEFTQHHHSNRLDHSIAVSYDSYVLAKKWHLNTTAVARGGLLHDLFYYDWR
ETKFDLGSHAFIHPRVALRNAEKLTKLTPMEKDIILKHMFGATLAVPKYRESLLVSLVDDYEAEHEFFGPLRMKVAKQLD
RFRGKVSAG

Sequences:

>Translated_169_residues
MKTNNAWQQDSEYVAIVEDLLAQPAVQRLAEFTQHHHSNRLDHSIAVSYDSYVLAKKWHLNTTAVARGGLLHDLFYYDWR
ETKFDLGSHAFIHPRVALRNAEKLTKLTPMEKDIILKHMFGATLAVPKYRESLLVSLVDDYEAEHEFFGPLRMKVAKQLD
RFRGKVSAG
>Mature_169_residues
MKTNNAWQQDSEYVAIVEDLLAQPAVQRLAEFTQHHHSNRLDHSIAVSYDSYVLAKKWHLNTTAVARGGLLHDLFYYDWR
ETKFDLGSHAFIHPRVALRNAEKLTKLTPMEKDIILKHMFGATLAVPKYRESLLVSLVDDYEAEHEFFGPLRMKVAKQLD
RFRGKVSAG

Specific function: Unknown

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19493; Mature: 19493

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNNAWQQDSEYVAIVEDLLAQPAVQRLAEFTQHHHSNRLDHSIAVSYDSYVLAKKWHL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEHEECC
NTTAVARGGLLHDLFYYDWRETKFDLGSHAFIHPRVALRNAEKLTKLTPMEKDIILKHMF
CHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHH
GATLAVPKYRESLLVSLVDDYEAEHEFFGPLRMKVAKQLDRFRGKVSAG
CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKTNNAWQQDSEYVAIVEDLLAQPAVQRLAEFTQHHHSNRLDHSIAVSYDSYVLAKKWHL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEHEECC
NTTAVARGGLLHDLFYYDWRETKFDLGSHAFIHPRVALRNAEKLTKLTPMEKDIILKHMF
CHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHH
GATLAVPKYRESLLVSLVDDYEAEHEFFGPLRMKVAKQLDRFRGKVSAG
CCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA