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The map label for this gene is 28378250

Identifier: 28378250

GI number: 28378250

Start: 1405154

End: 1405738

Strand: Direct

Name: 28378250

Synonym: lp_1539

Alternate gene names: NA

Gene position: 1405154-1405738 (Clockwise)

Preceding gene: 28378248

Following gene: 28378252

Centisome position: 42.47

GC content: 48.03

Gene sequence:

>585_bases
ATGATGAGCAAAAAATATGGGATCGGGTTAGCACTACTCACCGTGGTTCTGTTAGCTGGATGTGGCACCCAACAGTCGAC
GCAAAATAAGGCGACAAGCCAATCAACTAGCAGCCAAAGTAATTCGACCAAAAGTGTGACAGCCAAAACGAAAGTGTCAT
TAGCCGCAGCCATCAAAAAGTTTCAGCAACAATATCCGGACGCCAGTGTGACGAGTATTGAGTTAGAAGACCAACTCGGT
CGACCGGTTTACACGCTGGAAGGCGTTGGCGGCACCCAGGAACATGAATTACAACTCAATGGGCGAACCGGGAAGGTCAT
CAGTAAGCAGTCTGAGATGCTGGATCAAGATGATCAAGCTGACGCTGAGGGTGACCGGCTGAATCTTAACAAGGTAATCA
GTCCTAGTAAAGCGGTGGCGATTGCCATCCATGATCGTAACGGTGGCTATGCTAGCGAACTCAAGCTCGATAAGGACAAT
GGCACCACTTACTGGGAGGTCCAGGTACATCAAGGAAAGCAGCAAGTCGATATTAAGATTGATGCCTATGAAGGTCATAT
TTTGGAAACTGAGCACGACGATTAG

Upstream 100 bases:

>100_bases
ATTGCGATGAGGCGTCTCCCTTCCGTATACTAAGACTATCAAATAATGGGTACGGCTTCATAATAAGTGTTACTGACGCA
GCGACAAGGGGGTTATGGAG

Downstream 100 bases:

>100_bases
TACCACGTGGTTGCTGGTGAAAAGGGGCGGTAAGTAGCTTCATTTTGTCAGCAACTAGTCTTGAAATGGTCAGCCGGCTA
AACGTATCGCCCATTTTGTA

Product: lipoprotein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MMSKKYGIGLALLTVVLLAGCGTQQSTQNKATSQSTSSQSNSTKSVTAKTKVSLAAAIKKFQQQYPDASVTSIELEDQLG
RPVYTLEGVGGTQEHELQLNGRTGKVISKQSEMLDQDDQADAEGDRLNLNKVISPSKAVAIAIHDRNGGYASELKLDKDN
GTTYWEVQVHQGKQQVDIKIDAYEGHILETEHDD

Sequences:

>Translated_194_residues
MMSKKYGIGLALLTVVLLAGCGTQQSTQNKATSQSTSSQSNSTKSVTAKTKVSLAAAIKKFQQQYPDASVTSIELEDQLG
RPVYTLEGVGGTQEHELQLNGRTGKVISKQSEMLDQDDQADAEGDRLNLNKVISPSKAVAIAIHDRNGGYASELKLDKDN
GTTYWEVQVHQGKQQVDIKIDAYEGHILETEHDD
>Mature_194_residues
MMSKKYGIGLALLTVVLLAGCGTQQSTQNKATSQSTSSQSNSTKSVTAKTKVSLAAAIKKFQQQYPDASVTSIELEDQLG
RPVYTLEGVGGTQEHELQLNGRTGKVISKQSEMLDQDDQADAEGDRLNLNKVISPSKAVAIAIHDRNGGYASELKLDKDN
GTTYWEVQVHQGKQQVDIKIDAYEGHILETEHDD

Specific function: Unknown

COG id: COG3212

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21066; Mature: 21066

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSKKYGIGLALLTVVLLAGCGTQQSTQNKATSQSTSSQSNSTKSVTAKTKVSLAAAIKK
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
FQQQYPDASVTSIELEDQLGRPVYTLEGVGGTQEHELQLNGRTGKVISKQSEMLDQDDQA
HHHHCCCCCEEEEEEHHHCCCCEEEEECCCCCCCEEEEECCCCCCEECCHHHHCCCCCCC
DAEGDRLNLNKVISPSKAVAIAIHDRNGGYASELKLDKDNGTTYWEVQVHQGKQQVDIKI
CCCCCEEEHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCEEEEEEE
DAYEGHILETEHDD
EECCCEEEECCCCC
>Mature Secondary Structure
MMSKKYGIGLALLTVVLLAGCGTQQSTQNKATSQSTSSQSNSTKSVTAKTKVSLAAAIKK
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHH
FQQQYPDASVTSIELEDQLGRPVYTLEGVGGTQEHELQLNGRTGKVISKQSEMLDQDDQA
HHHHCCCCCEEEEEEHHHCCCCEEEEECCCCCCCEEEEECCCCCCEECCHHHHCCCCCCC
DAEGDRLNLNKVISPSKAVAIAIHDRNGGYASELKLDKDNGTTYWEVQVHQGKQQVDIKI
CCCCCEEEHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEECCCEEEEEEE
DAYEGHILETEHDD
EECCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA