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The map label for this gene is rpmF

Identifier: 28378248

GI number: 28378248

Start: 1403243

End: 1403422

Strand: Direct

Name: rpmF

Synonym: lp_1535a

Alternate gene names: 28378248

Gene position: 1403243-1403422 (Clockwise)

Preceding gene: 28378247

Following gene: 28378250

Centisome position: 42.42

GC content: 43.33

Gene sequence:

>180_bases
ATGGCTGTACCAGCAAGAAGAACATCTAAGATGCGTAAACGCAACCGTCGTGGTCATATTAAATTGGCTACACCAAATTT
GGCACCATGCCCAAATTGTGGCGAATTACGTGTATCACACCGTGTTTGCCCAAGTTGTGGATACTACAACGGCAAGCAAG
TCGTAAAAGTAAACAACTAA

Upstream 100 bases:

>100_bases
AGTTAAAAAACCTGTTCCCTGATCAGGAAGACAAGGATTAAGTTAGCTAGGCGTATCAAAACACACATTATGTGAATTCA
CTTGAAGGAGGTGTAGGTTG

Downstream 100 bases:

>100_bases
TTGTTAGTTGGTGAAAAGTTGCATTGCGGCCATGGCGCATGGAACTTTTCGTTACCATAATACGATCAAAAAGCCCGCTT
AGGTGGGCTTTTTTTGTTGT

Product: 50S ribosomal protein L32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 58

Protein sequence:

>59_residues
MAVPARRTSKMRKRNRRGHIKLATPNLAPCPNCGELRVSHRVCPSCGYYNGKQVVKVNN

Sequences:

>Translated_59_residues
MAVPARRTSKMRKRNRRGHIKLATPNLAPCPNCGELRVSHRVCPSCGYYNGKQVVKVNN
>Mature_58_residues
AVPARRTSKMRKRNRRGHIKLATPNLAPCPNCGELRVSHRVCPSCGYYNGKQVVKVNN

Specific function: Unknown

COG id: COG0333

COG function: function code J; Ribosomal protein L32

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L32P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL32_LACPL (Q88WS9)

Other databases:

- EMBL:   AL935256
- RefSeq:   NP_785140.1
- ProteinModelPortal:   Q88WS9
- SMR:   Q88WS9
- GeneID:   1061227
- GenomeReviews:   AL935263_GR
- NMPDR:   fig|220668.1.peg.1274
- HOGENOM:   HBG728381
- OMA:   MAKHPVP
- ProtClustDB:   PRK12286
- BioCyc:   LPLA220668:LP_1535A-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00340
- InterPro:   IPR002677
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01031

Pfam domain/function: PF01783 Ribosomal_L32p; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6635; Mature: 6504

Theoretical pI: Translated: 11.56; Mature: 11.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
6.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPARRTSKMRKRNRRGHIKLATPNLAPCPNCGELRVSHRVCPSCGYYNGKQVVKVNN
CCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
AVPARRTSKMRKRNRRGHIKLATPNLAPCPNCGELRVSHRVCPSCGYYNGKQVVKVNN
CCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566