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The map label for this gene is ylbN [H]

Identifier: 28378247

GI number: 28378247

Start: 1402629

End: 1403183

Strand: Direct

Name: ylbN [H]

Synonym: lp_1535

Alternate gene names: 28378247

Gene position: 1402629-1403183 (Clockwise)

Preceding gene: 28378246

Following gene: 28378248

Centisome position: 42.4

GC content: 42.34

Gene sequence:

>555_bases
ATGAAATGGTCACTTTCACAGCTTAAAACATACCGTGAAACGCCACTTCAGTTTGATGAAGCATTGGATTTAAAACACTC
CTTGATGAGCCGTTATCCAGAAATTATCGATGTTAAGTCAGTTCACGCAACTGGATTAGCGAGTTATGATAAGGATAATG
TGTTAATCACGGCGAAGATTGACGCAATGTTAACATTGCCGTCTAGTCGCTCGCTGACGCCAGTGGATGTCCCATTGGCT
TTTCAAATGACGGAATATTATGTTCCTCAGGGAACCGATCTGAGTCGTTTTGACGAAGAAACTGATACGGTAATTATTTT
ACCTGAAGATGATATTTTAGATTTTGATGTCGCTGTGGAGGATAATATTTTAATTCACATCCCCATGCAGATTCTTTCTG
AAGCTGAACAAGACGGCGCCCCGATGCCAACTGGTAAGGGCTGGGAAGTTCTCTCCGAGGACGACCAAGCGTTGCAAGCT
GCAGAACTTAAAACTGTTGATCCGCGTTTAGCTAAGTTAAAAAACCTGTTCCCTGATCAGGAAGACAAGGATTAA

Upstream 100 bases:

>100_bases
TTAGGTCTAATGACGGGCATTTTGGACTGTCAAGGAAAAAACATTGACAAAGGATTTTTACACAGGTATAATTTATCACG
TTGCATTAGGAGGTTTTTAA

Downstream 100 bases:

>100_bases
GTTAGCTAGGCGTATCAAAACACACATTATGTGAATTCACTTGAAGGAGGTGTAGGTTGATGGCTGTACCAGCAAGAAGA
ACATCTAAGATGCGTAAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKWSLSQLKTYRETPLQFDEALDLKHSLMSRYPEIIDVKSVHATGLASYDKDNVLITAKIDAMLTLPSSRSLTPVDVPLA
FQMTEYYVPQGTDLSRFDEETDTVIILPEDDILDFDVAVEDNILIHIPMQILSEAEQDGAPMPTGKGWEVLSEDDQALQA
AELKTVDPRLAKLKNLFPDQEDKD

Sequences:

>Translated_184_residues
MKWSLSQLKTYRETPLQFDEALDLKHSLMSRYPEIIDVKSVHATGLASYDKDNVLITAKIDAMLTLPSSRSLTPVDVPLA
FQMTEYYVPQGTDLSRFDEETDTVIILPEDDILDFDVAVEDNILIHIPMQILSEAEQDGAPMPTGKGWEVLSEDDQALQA
AELKTVDPRLAKLKNLFPDQEDKD
>Mature_184_residues
MKWSLSQLKTYRETPLQFDEALDLKHSLMSRYPEIIDVKSVHATGLASYDKDNVLITAKIDAMLTLPSSRSLTPVDVPLA
FQMTEYYVPQGTDLSRFDEETDTVIILPEDDILDFDVAVEDNILIHIPMQILSEAEQDGAPMPTGKGWEVLSEDDQALQA
AELKTVDPRLAKLKNLFPDQEDKD

Specific function: Unknown

COG id: COG1399

COG function: function code R; Predicted metal-binding, possibly nucleic acid-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003772 [H]

Pfam domain/function: PF02620 DUF177 [H]

EC number: NA

Molecular weight: Translated: 20738; Mature: 20738

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWSLSQLKTYRETPLQFDEALDLKHSLMSRYPEIIDVKSVHATGLASYDKDNVLITAKI
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEEEEE
DAMLTLPSSRSLTPVDVPLAFQMTEYYVPQGTDLSRFDEETDTVIILPEDDILDFDVAVE
EEEEECCCCCCCCEECCCEEEEEEEEECCCCCCHHHCCCCCCEEEEEECCCCEEEEEEEC
DNILIHIPMQILSEAEQDGAPMPTGKGWEVLSEDDQALQAAELKTVDPRLAKLKNLFPDQ
CCEEEEECHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHCCCCC
EDKD
CCCC
>Mature Secondary Structure
MKWSLSQLKTYRETPLQFDEALDLKHSLMSRYPEIIDVKSVHATGLASYDKDNVLITAKI
CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEEEEE
DAMLTLPSSRSLTPVDVPLAFQMTEYYVPQGTDLSRFDEETDTVIILPEDDILDFDVAVE
EEEEECCCCCCCCEECCCEEEEEEEEECCCCCCHHHCCCCCCEEEEEECCCCEEEEEEEC
DNILIHIPMQILSEAEQDGAPMPTGKGWEVLSEDDQALQAAELKTVDPRLAKLKNLFPDQ
CCEEEEECHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHCCCCC
EDKD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]