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The map label for this gene is sufC [C]

Identifier: 28378185

GI number: 28378185

Start: 1345128

End: 1345925

Strand: Direct

Name: sufC [C]

Synonym: lp_1468

Alternate gene names: 28378185

Gene position: 1345128-1345925 (Clockwise)

Preceding gene: 28378181

Following gene: 28378186

Centisome position: 40.66

GC content: 42.98

Gene sequence:

>798_bases
ATGGCAACCTTGGAAGTTAAAGATTTACACGTTGAAGTGACGGATGATGAGCAAAAAAAGTCTCGTGAGATTTTAAAAGG
CGTCAATTTATCTATGAAAACTGGTGAAATTCATGCCATTATGGGACCAAATGGGACTGGTAAGTCCACTTTATCACAAA
CTATTATGGGCCAACCGGCTTATCACGTTACTCAGGGTGATATCTTGTTGAACGGCGAAAGTATCGTAAACATGCCAGTT
GATGAACGTGCACGTAAGGGACTCTTCCTCGGCATGCAGTATCCAGCTGAAATTCAAGGGGTCACCAACGCTGAATTTTT
ACGGGCAGCAATGAACGCACGTCGACCAGCTGATGATCAAATCTCAGTGATGGCCTTTCTTAAAGAACTCGACAAGAATT
TGGCACTACTTAATATGAGCGAATCCATGACGGAACGTTACCTAAACGAAGGTTTCTCCGGTGGTGAAAAGAAGCGTAAC
GAAATTTTGCAATTATTGATGATCAAGCCATCATTCGCCTTATTGGACGAAATTGATTCCGGGCTTGATATCGATGCGTT
ACAAGTGGTTTCTAAGGGTGTTAATTCGATGCGGGGCGATAATTTCGGCTCATTGATTATCACGCATTATCAACGGCTGT
TAAACTACATTGTGCCCGATGTCGTTCACGTGATGATGGGTGGTCGAATCGTGAAGACTGGTAACGCCGACTTAGCAAAG
ACCCTTGAAAAAGAAGGTTATGCTGGTTTACGTGACGATTTGAACATTGATGTCAAACTTGTTGACGACGAAGATTAG

Upstream 100 bases:

>100_bases
GCCGATGTTACGCTATTTTTGTTGAAGCCGTTGACTAATCATTATATACGGAAGGAATAACGGCTTGGGTAATAAATTCA
ATTGTTGGAGGATGATTTAA

Downstream 100 bases:

>100_bases
GGGGTGGCAGTAATGGAAGCAACTGCTGATTATGAAACTATCAAAACAACGCTAGCTGCGGCTGCTAACGAACATGGTGA
ACCGCACTGGCTCGTTGAAC

Product: ABC transporter, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MATLEVKDLHVEVTDDEQKKSREILKGVNLSMKTGEIHAIMGPNGTGKSTLSQTIMGQPAYHVTQGDILLNGESIVNMPV
DERARKGLFLGMQYPAEIQGVTNAEFLRAAMNARRPADDQISVMAFLKELDKNLALLNMSESMTERYLNEGFSGGEKKRN
EILQLLMIKPSFALLDEIDSGLDIDALQVVSKGVNSMRGDNFGSLIITHYQRLLNYIVPDVVHVMMGGRIVKTGNADLAK
TLEKEGYAGLRDDLNIDVKLVDDED

Sequences:

>Translated_265_residues
MATLEVKDLHVEVTDDEQKKSREILKGVNLSMKTGEIHAIMGPNGTGKSTLSQTIMGQPAYHVTQGDILLNGESIVNMPV
DERARKGLFLGMQYPAEIQGVTNAEFLRAAMNARRPADDQISVMAFLKELDKNLALLNMSESMTERYLNEGFSGGEKKRN
EILQLLMIKPSFALLDEIDSGLDIDALQVVSKGVNSMRGDNFGSLIITHYQRLLNYIVPDVVHVMMGGRIVKTGNADLAK
TLEKEGYAGLRDDLNIDVKLVDDED
>Mature_264_residues
ATLEVKDLHVEVTDDEQKKSREILKGVNLSMKTGEIHAIMGPNGTGKSTLSQTIMGQPAYHVTQGDILLNGESIVNMPVD
ERARKGLFLGMQYPAEIQGVTNAEFLRAAMNARRPADDQISVMAFLKELDKNLALLNMSESMTERYLNEGFSGGEKKRNE
ILQLLMIKPSFALLDEIDSGLDIDALQVVSKGVNSMRGDNFGSLIITHYQRLLNYIVPDVVHVMMGGRIVKTGNADLAKT
LEKEGYAGLRDDLNIDVKLVDDED

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI1787972, Length=249, Percent_Identity=48.995983935743, Blast_Score=241, Evalue=3e-65,
Organism=Escherichia coli, GI1789593, Length=215, Percent_Identity=27.906976744186, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1789891, Length=228, Percent_Identity=30.2631578947368, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787029, Length=220, Percent_Identity=26.3636363636364, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786698, Length=188, Percent_Identity=29.2553191489362, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1788761, Length=216, Percent_Identity=25.9259259259259, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=236, Percent_Identity=26.271186440678, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71996809, Length=228, Percent_Identity=26.7543859649123, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI193209708, Length=238, Percent_Identity=27.7310924369748, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=215, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=248, Percent_Identity=27.0161290322581, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193211015, Length=248, Percent_Identity=27.0161290322581, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281363262, Length=231, Percent_Identity=29.004329004329, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24653245, Length=231, Percent_Identity=29.004329004329, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI161076684, Length=180, Percent_Identity=32.7777777777778, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581617, Length=180, Percent_Identity=32.7777777777778, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24581615, Length=180, Percent_Identity=32.7777777777778, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI161076682, Length=251, Percent_Identity=30.6772908366534, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI85726357, Length=215, Percent_Identity=28.8372093023256, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 29267; Mature: 29136

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLEVKDLHVEVTDDEQKKSREILKGVNLSMKTGEIHAIMGPNGTGKSTLSQTIMGQPA
CCCEEEEEEEEEECCCHHHHHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHCCCC
YHVTQGDILLNGESIVNMPVDERARKGLFLGMQYPAEIQGVTNAEFLRAAMNARRPADDQ
EEEECCCEEECCCCEEECCHHHHHHCCEEEECCCCHHHCCCCHHHHHHHHHHCCCCCCCH
ISVMAFLKELDKNLALLNMSESMTERYLNEGFSGGEKKRNEILQLLMIKPSFALLDEIDS
HHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCC
GLDIDALQVVSKGVNSMRGDNFGSLIITHYQRLLNYIVPDVVHVMMGGRIVKTGNADLAK
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHH
TLEKEGYAGLRDDLNIDVKLVDDED
HHHHCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
ATLEVKDLHVEVTDDEQKKSREILKGVNLSMKTGEIHAIMGPNGTGKSTLSQTIMGQPA
CCEEEEEEEEEECCCHHHHHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHCCCC
YHVTQGDILLNGESIVNMPVDERARKGLFLGMQYPAEIQGVTNAEFLRAAMNARRPADDQ
EEEECCCEEECCCCEEECCHHHHHHCCEEEECCCCHHHCCCCHHHHHHHHHHCCCCCCCH
ISVMAFLKELDKNLALLNMSESMTERYLNEGFSGGEKKRNEILQLLMIKPSFALLDEIDS
HHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCC
GLDIDALQVVSKGVNSMRGDNFGSLIITHYQRLLNYIVPDVVHVMMGGRIVKTGNADLAK
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHH
TLEKEGYAGLRDDLNIDVKLVDDED
HHHHCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]