| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377782
Identifier: 28377782
GI number: 28377782
Start: 893448
End: 893663
Strand: Direct
Name: 28377782
Synonym: lp_0961
Alternate gene names: NA
Gene position: 893448-893663 (Clockwise)
Preceding gene: 28377775
Following gene: 28377783
Centisome position: 27.01
GC content: 49.07
Gene sequence:
>216_bases ATGAGAGGAGGCCGAGTCATGGATCGAGGACGACGCGCAACGCTGGAAGAACGAATTGCGATCGTAAAGTATACGCTGGA CCATTGCAACGATTATCGAGAAGCCGCTAAGCATTTTAATGTTTCGTATCCACAAGTCTATACATGGGTACGAAAATATC GACAACACGGCATGGAAGGTTTGGTGGATCACCGTGGCCGACCCAAGCAAGGCTAA
Upstream 100 bases:
>100_bases CTGATTCGAAATAATTTATTAAAAATCGCAACGAATCAGGCAAGTCACGGGGAAAAAGCTACAAAAAATTGAGAACTCTT GGTATGATGAATAGTAGTGA
Downstream 100 bases:
>100_bases GTCAGCATTGTACATATAAACTGTGTGGGCGAGTGCCCTTTGATGGCCAATCTGACATGGTCGTTTAATCGATATCGGTC TTTTTAAAGTGTCCGTTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 71
Protein sequence:
>71_residues MRGGRVMDRGRRATLEERIAIVKYTLDHCNDYREAAKHFNVSYPQVYTWVRKYRQHGMEGLVDHRGRPKQG
Sequences:
>Translated_71_residues MRGGRVMDRGRRATLEERIAIVKYTLDHCNDYREAAKHFNVSYPQVYTWVRKYRQHGMEGLVDHRGRPKQG >Mature_71_residues MRGGRVMDRGRRATLEERIAIVKYTLDHCNDYREAAKHFNVSYPQVYTWVRKYRQHGMEGLVDHRGRPKQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8462; Mature: 8462
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGGRVMDRGRRATLEERIAIVKYTLDHCNDYREAAKHFNVSYPQVYTWVRKYRQHGMEG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHH LVDHRGRPKQG HHHCCCCCCCC >Mature Secondary Structure MRGGRVMDRGRRATLEERIAIVKYTLDHCNDYREAAKHFNVSYPQVYTWVRKYRQHGMEG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHH LVDHRGRPKQG HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA