Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28377782

Identifier: 28377782

GI number: 28377782

Start: 893448

End: 893663

Strand: Direct

Name: 28377782

Synonym: lp_0961

Alternate gene names: NA

Gene position: 893448-893663 (Clockwise)

Preceding gene: 28377775

Following gene: 28377783

Centisome position: 27.01

GC content: 49.07

Gene sequence:

>216_bases
ATGAGAGGAGGCCGAGTCATGGATCGAGGACGACGCGCAACGCTGGAAGAACGAATTGCGATCGTAAAGTATACGCTGGA
CCATTGCAACGATTATCGAGAAGCCGCTAAGCATTTTAATGTTTCGTATCCACAAGTCTATACATGGGTACGAAAATATC
GACAACACGGCATGGAAGGTTTGGTGGATCACCGTGGCCGACCCAAGCAAGGCTAA

Upstream 100 bases:

>100_bases
CTGATTCGAAATAATTTATTAAAAATCGCAACGAATCAGGCAAGTCACGGGGAAAAAGCTACAAAAAATTGAGAACTCTT
GGTATGATGAATAGTAGTGA

Downstream 100 bases:

>100_bases
GTCAGCATTGTACATATAAACTGTGTGGGCGAGTGCCCTTTGATGGCCAATCTGACATGGTCGTTTAATCGATATCGGTC
TTTTTAAAGTGTCCGTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MRGGRVMDRGRRATLEERIAIVKYTLDHCNDYREAAKHFNVSYPQVYTWVRKYRQHGMEGLVDHRGRPKQG

Sequences:

>Translated_71_residues
MRGGRVMDRGRRATLEERIAIVKYTLDHCNDYREAAKHFNVSYPQVYTWVRKYRQHGMEGLVDHRGRPKQG
>Mature_71_residues
MRGGRVMDRGRRATLEERIAIVKYTLDHCNDYREAAKHFNVSYPQVYTWVRKYRQHGMEGLVDHRGRPKQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8462; Mature: 8462

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGRVMDRGRRATLEERIAIVKYTLDHCNDYREAAKHFNVSYPQVYTWVRKYRQHGMEG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHH
LVDHRGRPKQG
HHHCCCCCCCC
>Mature Secondary Structure
MRGGRVMDRGRRATLEERIAIVKYTLDHCNDYREAAKHFNVSYPQVYTWVRKYRQHGMEG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHH
LVDHRGRPKQG
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA