| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377377
Identifier: 28377377
GI number: 28377377
Start: 431953
End: 432123
Strand: Direct
Name: 28377377
Synonym: lp_0483
Alternate gene names: NA
Gene position: 431953-432123 (Clockwise)
Preceding gene: 28377375
Following gene: 28377378
Centisome position: 13.06
GC content: 40.35
Gene sequence:
>171_bases ATGAGCGCAAAGTGTCCAAGCTGCGGAGCAAGTGTTGAATTAGAAAAGGATGTTCTAACAGGTGAAATTGTTGAATGTGA GGAATGTGGTGAAGAACTTGAAGTGAAAAATGAAGACGGAACCTTTTTGCTTAACTTAGCTCCTGATGTAGAAGAAGATT GGGGAGAATAG
Upstream 100 bases:
>100_bases TTGTAAAATGAATTTATCGAATTAAATAACAATGAGTAAGTCAATATTAAGTTTGCTTTTTTGTTATTAATTTGAAAGAA ACTTATGGAGGTATTTAATT
Downstream 100 bases:
>100_bases TAATGCCAAATCAGGTCTTATTTTGTATTACAAAAATGAGATATGAAGAAAAAAGAATTTATCATTATTTAGAAGAGTCA GGATTAAGCATCAAGATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 56; Mature: 55
Protein sequence:
>56_residues MSAKCPSCGASVELEKDVLTGEIVECEECGEELEVKNEDGTFLLNLAPDVEEDWGE
Sequences:
>Translated_56_residues MSAKCPSCGASVELEKDVLTGEIVECEECGEELEVKNEDGTFLLNLAPDVEEDWGE >Mature_55_residues SAKCPSCGASVELEKDVLTGEIVECEECGEELEVKNEDGTFLLNLAPDVEEDWGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6091; Mature: 5960
Theoretical pI: Translated: 3.47; Mature: 3.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 7.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKCPSCGASVELEKDVLTGEIVECEECGEELEVKNEDGTFLLNLAPDVEEDWGE CCCCCCCCCCCEEECCCCCCCCEECHHHCCCCCEEECCCCCEEEEECCCCCCCCCC >Mature Secondary Structure SAKCPSCGASVELEKDVLTGEIVECEECGEELEVKNEDGTFLLNLAPDVEEDWGE CCCCCCCCCCEEECCCCCCCCEECHHHCCCCCEEECCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA