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The map label for this gene is rimK [H]

Identifier: 28377378

GI number: 28377378

Start: 432126

End: 432995

Strand: Direct

Name: rimK [H]

Synonym: lp_0484

Alternate gene names: 28377378

Gene position: 432126-432995 (Clockwise)

Preceding gene: 28377377

Following gene: 28377379

Centisome position: 13.06

GC content: 34.94

Gene sequence:

>870_bases
ATGCCAAATCAGGTCTTATTTTGTATTACAAAAATGAGATATGAAGAAAAAAGAATTTATCATTATTTAGAAGAGTCAGG
ATTAAGCATCAAGATTATGTTAGATTCTTCTAATCTAGATGAGGTTGTCGCCCATAACTCGGATTATTGCCTATGTATTG
TGAGAGTCATGTCACAACATCGTGCATTTAGAATAGCTGAGTATATGGAAGCCTTAGGTATACCGACACTGAATTCAAGT
CGTGCTATTCAGATTTGTGCCGACAAGGCGATTCAAGCATTGATTTTAGCCAATAGAGATGTTATTAAGCAACCTCATTT
TTCCATCTTACGTAACTACGAGGATTTGTCGAATTTCAATGGGAAAATGGTAGTGAAGCCGGTAAGTTCGTCATGGGGCA
GAGGGATTTCATTAATCGAAAATGAAGACGCCCTGACTACTTGGAAAATTAGTCATCAAGAATTAGATATACAAAACCAA
AATTTACCATATCTAATTCAAGAGTTTATTGATAAGCCAAACTATGATGTTCGTATTGTCATTATTAATACAAAACCAGT
TGTGGCTTTTAAGAGAGTTAGTGCGAATAACTGGAAAACTAACACACATTTGGGGGCTACCGTAGTACCAATTGTTATTG
ATGATTCAATTAATAAAATAGTGACCGAAATTATTAAAGTTGTTGGGCCAGGAATTTATGGATTAGATTTAATGAAAAAT
CGGCAAAATGAATGGATCTTTTGTGAAATCAATCAAAATCCCGAGTTTGCTCATTCCTGGAAGATCCATCATGTAGATGT
TGCTGAAAAGATTGCGCAATACGTATCAAGTAAAGTTAAGGTGGGACAAAAGAATGCAAGCACACATTAA

Upstream 100 bases:

>100_bases
AATGTGAGGAATGTGGTGAAGAACTTGAAGTGAAAAATGAAGACGGAACCTTTTTGCTTAACTTAGCTCCTGATGTAGAA
GAAGATTGGGGAGAATAGTA

Downstream 100 bases:

>100_bases
AGAAAAAGACTATTTTCCACTATCTTACACTATCACACGTGTACTGAATTCTGGTGTTGTAATGAGTATCGAAAAGAACG
AGAAAGAACTGAAGGGTCTA

Product: ribosomal protein S6 modification protein

Products: NA

Alternate protein names: AAA--lysW ligase lysX [H]

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MPNQVLFCITKMRYEEKRIYHYLEESGLSIKIMLDSSNLDEVVAHNSDYCLCIVRVMSQHRAFRIAEYMEALGIPTLNSS
RAIQICADKAIQALILANRDVIKQPHFSILRNYEDLSNFNGKMVVKPVSSSWGRGISLIENEDALTTWKISHQELDIQNQ
NLPYLIQEFIDKPNYDVRIVIINTKPVVAFKRVSANNWKTNTHLGATVVPIVIDDSINKIVTEIIKVVGPGIYGLDLMKN
RQNEWIFCEINQNPEFAHSWKIHHVDVAEKIAQYVSSKVKVGQKNASTH

Sequences:

>Translated_289_residues
MPNQVLFCITKMRYEEKRIYHYLEESGLSIKIMLDSSNLDEVVAHNSDYCLCIVRVMSQHRAFRIAEYMEALGIPTLNSS
RAIQICADKAIQALILANRDVIKQPHFSILRNYEDLSNFNGKMVVKPVSSSWGRGISLIENEDALTTWKISHQELDIQNQ
NLPYLIQEFIDKPNYDVRIVIINTKPVVAFKRVSANNWKTNTHLGATVVPIVIDDSINKIVTEIIKVVGPGIYGLDLMKN
RQNEWIFCEINQNPEFAHSWKIHHVDVAEKIAQYVSSKVKVGQKNASTH
>Mature_288_residues
PNQVLFCITKMRYEEKRIYHYLEESGLSIKIMLDSSNLDEVVAHNSDYCLCIVRVMSQHRAFRIAEYMEALGIPTLNSSR
AIQICADKAIQALILANRDVIKQPHFSILRNYEDLSNFNGKMVVKPVSSSWGRGISLIENEDALTTWKISHQELDIQNQN
LPYLIQEFIDKPNYDVRIVIINTKPVVAFKRVSANNWKTNTHLGATVVPIVIDDSINKIVTEIIKVVGPGIYGLDLMKNR
QNEWIFCEINQNPEFAHSWKIHHVDVAEKIAQYVSSKVKVGQKNASTH

Specific function: Catalyzes the ATP-dependent binding between the amino group of alpha-aminoadipate (AAA) and the gamma-carboxyl group of the C-terminal glutamate residue of lysW (Probable) [H]

COG id: COG0189

COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR011870
- InterPro:   IPR016185
- InterPro:   IPR004666 [H]

Pfam domain/function: PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 33050; Mature: 32918

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNQVLFCITKMRYEEKRIYHYLEESGLSIKIMLDSSNLDEVVAHNSDYCLCIVRVMSQH
CCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHH
RAFRIAEYMEALGIPTLNSSRAIQICADKAIQALILANRDVIKQPHFSILRNYEDLSNFN
HHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCHHHCCCHHHHHHCHHHHHCCC
GKMVVKPVSSSWGRGISLIENEDALTTWKISHQELDIQNQNLPYLIQEFIDKPNYDVRIV
CEEEEEECCCCCCCCEEEEECCCCEEEEEECCCEECCCCCCCCHHHHHHHCCCCCCEEEE
IINTKPVVAFKRVSANNWKTNTHLGATVVPIVIDDSINKIVTEIIKVVGPGIYGLDLMKN
EECCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEHHHHCC
RQNEWIFCEINQNPEFAHSWKIHHVDVAEKIAQYVSSKVKVGQKNASTH
CCCCEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PNQVLFCITKMRYEEKRIYHYLEESGLSIKIMLDSSNLDEVVAHNSDYCLCIVRVMSQH
CCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHH
RAFRIAEYMEALGIPTLNSSRAIQICADKAIQALILANRDVIKQPHFSILRNYEDLSNFN
HHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCHHHCCCHHHHHHCHHHHHCCC
GKMVVKPVSSSWGRGISLIENEDALTTWKISHQELDIQNQNLPYLIQEFIDKPNYDVRIV
CEEEEEECCCCCCCCEEEEECCCCEEEEEECCCEECCCCCCCCHHHHHHHCCCCCCEEEE
IINTKPVVAFKRVSANNWKTNTHLGATVVPIVIDDSINKIVTEIIKVVGPGIYGLDLMKN
EECCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEHHHHCC
RQNEWIFCEINQNPEFAHSWKIHHVDVAEKIAQYVSSKVKVGQKNASTH
CCCCEEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Glu; Ribosomal protein S6 [C]

Specific reaction: Catalyzes the addition of glutamic acids to the carboxyl end of ribosomal protein S6 [C]

General reaction: Ligases; Forming Carbon-Nitrogen Bonds; Acid-D-Amino-Acid Ligases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726; 12042311 [H]