Click here to switch to the map view.

The map label for this gene is plnB

Identifier: 28377320

GI number: 28377320

Start: 371705

End: 373033

Strand: Direct

Name: plnB

Synonym: lp_0416

Alternate gene names: NA

Gene position: 371705-373033 (Clockwise)

Preceding gene: 28377319

Following gene: 28377321

Centisome position: 11.24

GC content: 32.81

Gene sequence:

>1329_bases
TTGGTTGAAATCAGTATCTTCGATAGCGTTATTCAATCGTTTTTCATTTATCTTGGCATTATCTTGGTATATAACTTCAT
CTTCAGTAATACGAACATTAAAAGAATCATTTATTCGTTGATTTTATTACTAGTGCTGTCCTTAGTAGGAGCTATCTTGG
ATGACACTACATCGCTAATTTTGGTTTTGGGGGCAATTATTAAGGAAAAGTGCCAACCAAAAATAAATTATTATCATCTA
AATGTATTCTTAATGTTGATTTCTAGTCAGATAGTAATTTTAGCTTTGGCTTCTTATTTAAGTAGAGGATTTCTGTATAT
CTACTTAGATGCCGATAAAATTTCTGGCTTGTCGGAGTATGGTGATTTATTCATTGGTATTGAAATTATTGTGATGTATA
TTATCGGATTTTTGGTGTTCAATCTTGTGTACAAAATGGTGAGACGATACACAGGCTCGTTTGATATAAGTGATGACGAA
AGAATAAATAGGCATCTATTCATTATATTGTTAGCTTTCTTTGGATCAATAGAAATGTTGTTATTTATTAGCAACTTTCA
AGGTGTAACAGCTACAATTCAACTAACTTTACTGTTGACATTTGTTTTGATGCTTGGGCTTATTAGTTGGCAAACATTAG
AAACGATTAGAGTATATGCTTGGCAAAAAAAGATAGCAGCTGAAAAATTGCAGAATAAGCAATTAAATGATTATCTTAAG
AGTGTTGAGCATCAATATCTAGAATTAAGAAAATTTAAACATGATTATAAGAACCTAATTGCTAGTTTAAATACTCAAGA
TAATATAAGTGAAATTAAGGATTATTTGACCGACTATACCCAGAGCGGAGAATTCAGAGCAAGCCTAAATGACGGTAGCA
TTGCAAGTGTTCAGCATCTGAAGAATGAGATATTGCGCGGGTTAGTTGTACAGAAGTTTTTTTATGCGAAACAGTGCGGG
GTTAAGTTGACGATTGAAATAGCTAACACTGACTTTATTCTCAGTCATGGTGTTACAGTGGCTGTACGTATTATTGGTAA
TTTATTGGATAATGCCATTGAGCAAGCCCAAAAAATGACTGATAAAATAGTGACAGTAGCTTTTAATGAAATTGATAACA
CCGCTGAAATTGCCATTAGTAATCCTATCGATTCAGATTTTAATCAGCATCAGATTTTTGAAACTGGTTATTCAACTAAG
GGTAGTAATCGTGGCTTAGGTCTGACTAATGTGCGGGATCTTGTTGAACAGCAGAAGGGTTTCTATATGGATATTGAAAC
CAAGAAAAATTATGTCACAATGACGTTAATTGTTACGGAGGATAAATAA

Upstream 100 bases:

>100_bases
AGACTATAAAATGATAATTTTGCTGATAAAGTAAACTAATAATCATTATTTTAGAATAGTTAGATAATGATCGAATAAAA
AATACTTTAGAGGTAGTAGC

Downstream 100 bases:

>100_bases
GTGTTTCCAATTTATTTATTAGAAGATAACGAGGCCCAAAGAGTAGAGTATATAAGTATTATAAAGAATATAATCATGAT
TAAAGAATATGATATGCAGT

Product: histidine protein kinase PlnB; sensor protein

Products: NA

Alternate protein names: Histidine Kinase; Signal Transduction Protein; Accessory Gene Regulator Protein C; Two-Component Sensor Histidine Kinase; Histidine Protein Kinase; Histidine Kinase Of Competence Regulon ComD; Accessory Gene Regulator C; Accessory Protein Regulator Protein C; Sensor Histidine Kinase ComD; Histidine Protein Kinase PlnB; Lactacin F Two-Component System Histidine Kinase; Histidine Kinase Domain Protein; Histidine Protein Kinase ComD; Sensory Histidine Kinase DcuS Citrate/Malate Sensor; Sensor Histidine Kinase BlpH; Two-Component Sensor Kinase; Sensor Histidine Kinase-Like Protein; Signal Transduction Protein With A C-Terminal ATPase Domain; Histidine Kinase-Like ATPase; AbpK Sensory Transduction Histidine Kinase; Bacteriocin Production-Related Histidine Kinase; Two-Component System Sensor Histidine Kinase Degenerate

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MVEISIFDSVIQSFFIYLGIILVYNFIFSNTNIKRIIYSLILLLVLSLVGAILDDTTSLILVLGAIIKEKCQPKINYYHL
NVFLMLISSQIVILALASYLSRGFLYIYLDADKISGLSEYGDLFIGIEIIVMYIIGFLVFNLVYKMVRRYTGSFDISDDE
RINRHLFIILLAFFGSIEMLLFISNFQGVTATIQLTLLLTFVLMLGLISWQTLETIRVYAWQKKIAAEKLQNKQLNDYLK
SVEHQYLELRKFKHDYKNLIASLNTQDNISEIKDYLTDYTQSGEFRASLNDGSIASVQHLKNEILRGLVVQKFFYAKQCG
VKLTIEIANTDFILSHGVTVAVRIIGNLLDNAIEQAQKMTDKIVTVAFNEIDNTAEIAISNPIDSDFNQHQIFETGYSTK
GSNRGLGLTNVRDLVEQQKGFYMDIETKKNYVTMTLIVTEDK

Sequences:

>Translated_442_residues
MVEISIFDSVIQSFFIYLGIILVYNFIFSNTNIKRIIYSLILLLVLSLVGAILDDTTSLILVLGAIIKEKCQPKINYYHL
NVFLMLISSQIVILALASYLSRGFLYIYLDADKISGLSEYGDLFIGIEIIVMYIIGFLVFNLVYKMVRRYTGSFDISDDE
RINRHLFIILLAFFGSIEMLLFISNFQGVTATIQLTLLLTFVLMLGLISWQTLETIRVYAWQKKIAAEKLQNKQLNDYLK
SVEHQYLELRKFKHDYKNLIASLNTQDNISEIKDYLTDYTQSGEFRASLNDGSIASVQHLKNEILRGLVVQKFFYAKQCG
VKLTIEIANTDFILSHGVTVAVRIIGNLLDNAIEQAQKMTDKIVTVAFNEIDNTAEIAISNPIDSDFNQHQIFETGYSTK
GSNRGLGLTNVRDLVEQQKGFYMDIETKKNYVTMTLIVTEDK
>Mature_442_residues
MVEISIFDSVIQSFFIYLGIILVYNFIFSNTNIKRIIYSLILLLVLSLVGAILDDTTSLILVLGAIIKEKCQPKINYYHL
NVFLMLISSQIVILALASYLSRGFLYIYLDADKISGLSEYGDLFIGIEIIVMYIIGFLVFNLVYKMVRRYTGSFDISDDE
RINRHLFIILLAFFGSIEMLLFISNFQGVTATIQLTLLLTFVLMLGLISWQTLETIRVYAWQKKIAAEKLQNKQLNDYLK
SVEHQYLELRKFKHDYKNLIASLNTQDNISEIKDYLTDYTQSGEFRASLNDGSIASVQHLKNEILRGLVVQKFFYAKQCG
VKLTIEIANTDFILSHGVTVAVRIIGNLLDNAIEQAQKMTDKIVTVAFNEIDNTAEIAISNPIDSDFNQHQIFETGYSTK
GSNRGLGLTNVRDLVEQQKGFYMDIETKKNYVTMTLIVTEDK

Specific function: Unknown

COG id: COG2972

COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50437; Mature: 50437

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEISIFDSVIQSFFIYLGIILVYNFIFSNTNIKRIIYSLILLLVLSLVGAILDDTTSLI
CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLGAIIKEKCQPKINYYHLNVFLMLISSQIVILALASYLSRGFLYIYLDADKISGLSEY
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHCCHHHH
GDLFIGIEIIVMYIIGFLVFNLVYKMVRRYTGSFDISDDERINRHLFIILLAFFGSIEML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LFISNFQGVTATIQLTLLLTFVLMLGLISWQTLETIRVYAWQKKIAAEKLQNKQLNDYLK
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SVEHQYLELRKFKHDYKNLIASLNTQDNISEIKDYLTDYTQSGEFRASLNDGSIASVQHL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH
KNEILRGLVVQKFFYAKQCGVKLTIEIANTDFILSHGVTVAVRIIGNLLDNAIEQAQKMT
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH
DKIVTVAFNEIDNTAEIAISNPIDSDFNQHQIFETGYSTKGSNRGLGLTNVRDLVEQQKG
HHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC
FYMDIETKKNYVTMTLIVTEDK
CEEEEECCCCEEEEEEEEECCC
>Mature Secondary Structure
MVEISIFDSVIQSFFIYLGIILVYNFIFSNTNIKRIIYSLILLLVLSLVGAILDDTTSLI
CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLGAIIKEKCQPKINYYHLNVFLMLISSQIVILALASYLSRGFLYIYLDADKISGLSEY
HHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHCCHHHH
GDLFIGIEIIVMYIIGFLVFNLVYKMVRRYTGSFDISDDERINRHLFIILLAFFGSIEML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LFISNFQGVTATIQLTLLLTFVLMLGLISWQTLETIRVYAWQKKIAAEKLQNKQLNDYLK
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SVEHQYLELRKFKHDYKNLIASLNTQDNISEIKDYLTDYTQSGEFRASLNDGSIASVQHL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH
KNEILRGLVVQKFFYAKQCGVKLTIEIANTDFILSHGVTVAVRIIGNLLDNAIEQAQKMT
HHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHH
DKIVTVAFNEIDNTAEIAISNPIDSDFNQHQIFETGYSTKGSNRGLGLTNVRDLVEQQKG
HHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC
FYMDIETKKNYVTMTLIVTEDK
CEEEEECCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA