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The map label for this gene is plnA

Identifier: 28377319

GI number: 28377319

Start: 371368

End: 371514

Strand: Direct

Name: plnA

Synonym: lp_0415

Alternate gene names: 28377319

Gene position: 371368-371514 (Clockwise)

Preceding gene: 28377318

Following gene: 28377320

Centisome position: 11.23

GC content: 33.33

Gene sequence:

>147_bases
ATGAAAATTCAAATTAAAGGTATGAAGCAACTTAGTAATAAGGAAATGCAAAAAATAGTAGGTGGAAAGAGTAGTGCGTA
TTCTTTGCAGATGGGGGCAACTGCAATTAAACAGGTAAAGAAACTGTTTAAAAAATGGGGATGGTAA

Upstream 100 bases:

>100_bases
ATTTCATGGTGATTCACGTTTAAATTTAAAAAATGTACGTTAATAGAAATAATTCCTCCGTACTTCAAAAACACATTATC
CTAAAAGCGAGGTGATTATT

Downstream 100 bases:

>100_bases
TTGATTTATTGAATAACTGTTTTTCAAGTTATATTTCGTATAGATGGCGTAAGGTGGGGCATTTTTAAAGAGTCACAACA
CTTGAAAAGAAGACTATAAA

Product: plantaricin A precursor peptide, induction factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 48; Mature: 48

Protein sequence:

>48_residues
MKIQIKGMKQLSNKEMQKIVGGKSSAYSLQMGATAIKQVKKLFKKWGW

Sequences:

>Translated_48_residues
MKIQIKGMKQLSNKEMQKIVGGKSSAYSLQMGATAIKQVKKLFKKWGW
>Mature_48_residues
MKIQIKGMKQLSNKEMQKIVGGKSSAYSLQMGATAIKQVKKLFKKWGW

Specific function: This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore- forming protein, creating a channel in the cell membrane through a "barrel stave" mechanism

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PLNA_LACPL (P80214)

Other databases:

- EMBL:   X75323
- EMBL:   X94434
- EMBL:   AL935253
- PIR:   A45913
- RefSeq:   NP_784211.1
- PDB:   1YTR
- PDBsum:   1YTR
- ProteinModelPortal:   P80214
- SMR:   P80214
- GeneID:   1064174
- GenomeReviews:   AL935263_GR
- KEGG:   lpl:lp_0415
- NMPDR:   fig|220668.1.peg.345
- BioCyc:   LPLA220668:LP_0415-MONOMER
- GO:   GO:0019835
- InterPro:   IPR010133
- TIGRFAMs:   TIGR01847

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5458; Mature: 5458

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.3 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQIKGMKQLSNKEMQKIVGGKSSAYSLQMGATAIKQVKKLFKKWGW
CCEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIQIKGMKQLSNKEMQKIVGGKSSAYSLQMGATAIKQVKKLFKKWGW
CCEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8117074; 8755874; 12566566; 8245827