| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377263
Identifier: 28377263
GI number: 28377263
Start: 315736
End: 316008
Strand: Direct
Name: 28377263
Synonym: lp_0346
Alternate gene names: NA
Gene position: 315736-316008 (Clockwise)
Preceding gene: 28377262
Following gene: 28377264
Centisome position: 9.54
GC content: 36.26
Gene sequence:
>273_bases ATGGATACGCCACTATTCTTAAATGTTGTCGCCTATGTGCTATTAATATTGGTATTACAATATATCAAATTCAAATTTCC AGACAGTACCTTTATCCGTTTCTTTCAAAAATACGGGTGGTGGTTAATTGGGCTATGTTTTGTCGCAATATTGGTGATTT TGGCCGCACCGCAATTTCAGAACCCATTTAATGCGTTAGATGTACCGGCTATTGGGGTCATGTTAGTATTCGGGTACTTC TTTATTAAGGATAAAAAATCGAAACATAAGTGA
Upstream 100 bases:
>100_bases CAGCAATCTAGTTATATTCGTTATAAGCATTAGATTATTTTCCGCCTGGAATACCATTTGGTGGGTTATCTTAATACTAG AGCATAAAGGGGGTCATATC
Downstream 100 bases:
>100_bases TGATTAAATGAGATAGCACCTCGAACGATGATGTCGTCCTGAGAGGTGCTATTTTTTTGCCTAAAAATCGATTTGAGAAG CACTGATGTTTAGCCGTTTT
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MDTPLFLNVVAYVLLILVLQYIKFKFPDSTFIRFFQKYGWWLIGLCFVAILVILAAPQFQNPFNALDVPAIGVMLVFGYF FIKDKKSKHK
Sequences:
>Translated_90_residues MDTPLFLNVVAYVLLILVLQYIKFKFPDSTFIRFFQKYGWWLIGLCFVAILVILAAPQFQNPFNALDVPAIGVMLVFGYF FIKDKKSKHK >Mature_90_residues MDTPLFLNVVAYVLLILVLQYIKFKFPDSTFIRFFQKYGWWLIGLCFVAILVILAAPQFQNPFNALDVPAIGVMLVFGYF FIKDKKSKHK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10481; Mature: 10481
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTPLFLNVVAYVLLILVLQYIKFKFPDSTFIRFFQKYGWWLIGLCFVAILVILAAPQFQ CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NPFNALDVPAIGVMLVFGYFFIKDKKSKHK CCCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDTPLFLNVVAYVLLILVLQYIKFKFPDSTFIRFFQKYGWWLIGLCFVAILVILAAPQFQ CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NPFNALDVPAIGVMLVFGYFFIKDKKSKHK CCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA