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The map label for this gene is 28377264

Identifier: 28377264

GI number: 28377264

Start: 316235

End: 316777

Strand: Direct

Name: 28377264

Synonym: lp_0347

Alternate gene names: NA

Gene position: 316235-316777 (Clockwise)

Preceding gene: 28377263

Following gene: 28377265

Centisome position: 9.56

GC content: 45.67

Gene sequence:

>543_bases
ATGTATGAATTGTTTATTTTAGGACAGTTGATGGATCATCCGATGACGGGCTACCAGTTGCGTAAAGCGCTGGTAAACGT
AGTTGGTTCAGAATTAACCATTAGTTTTGGCGCGTTGTACCCGTTGCTAGATAAGTTAGCCGCGGCTGAAGAATTAACAC
TGGCGTTTAAGCGGACCACTAATAAACGGCCACAAAAGTTAGCCACGATAACAGCGGCTGGTCGCACGCAATTTTGGCAG
TTAGTTATGACGCCAGTCGCGCTCAATAAGCAAACGCAGTTAACGTTTCAAATAAAGCTGAATTTTTTACATTTATTAAG
TTGTGATCAGCAGCAAGTAATCTTGTTGGATTTTCAGCAATTTGCACAGGGACAGGTCGCACGCTTAACGGCGCAGCACA
AACGGGTGATGACGAATACCCACATGCTTGCCGCTGATATTCAAGATGCGTTGATGGTCAATGAGTTACAACGGGTACGA
GCCCAAGCACAATTAGACTGGCTTGACCGCCAGTTGCGCAATGGAGGGGAAGTTAAGGGATGA

Upstream 100 bases:

>100_bases
TATTCGGTAACGGAGGGGCATAATTAAAAAATCAGTTTGGAACCTTGCAATATATCTAAAAGATATATATACTTAACAGC
GCGAAGGATTGGTGAATTTA

Downstream 100 bases:

>100_bases
AAACAATGTCGTTTGCGACTGATCCACAAATTCAAAAGCATCGCTGGTGGATATTGGTTGCGGTATGTTTATTTACGTTC
ATGTCAACGTTAGATGGGAG

Product: transcription regulator (putative)

Products: NA

Alternate protein names: Transcription Regulator; PadR-Like Family Transcriptional Regulator; PadR Family Transcriptional Regulator; Transcriptional Regulator PadR-Like Family

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MYELFILGQLMDHPMTGYQLRKALVNVVGSELTISFGALYPLLDKLAAAEELTLAFKRTTNKRPQKLATITAAGRTQFWQ
LVMTPVALNKQTQLTFQIKLNFLHLLSCDQQQVILLDFQQFAQGQVARLTAQHKRVMTNTHMLAADIQDALMVNELQRVR
AQAQLDWLDRQLRNGGEVKG

Sequences:

>Translated_180_residues
MYELFILGQLMDHPMTGYQLRKALVNVVGSELTISFGALYPLLDKLAAAEELTLAFKRTTNKRPQKLATITAAGRTQFWQ
LVMTPVALNKQTQLTFQIKLNFLHLLSCDQQQVILLDFQQFAQGQVARLTAQHKRVMTNTHMLAADIQDALMVNELQRVR
AQAQLDWLDRQLRNGGEVKG
>Mature_180_residues
MYELFILGQLMDHPMTGYQLRKALVNVVGSELTISFGALYPLLDKLAAAEELTLAFKRTTNKRPQKLATITAAGRTQFWQ
LVMTPVALNKQTQLTFQIKLNFLHLLSCDQQQVILLDFQQFAQGQVARLTAQHKRVMTNTHMLAADIQDALMVNELQRVR
AQAQLDWLDRQLRNGGEVKG

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20437; Mature: 20437

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYELFILGQLMDHPMTGYQLRKALVNVVGSELTISFGALYPLLDKLAAAEELTLAFKRTT
CEEEEEEHHHHCCCCCHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCC
NKRPQKLATITAAGRTQFWQLVMTPVALNKQTQLTFQIKLNFLHLLSCDQQQVILLDFQQ
CCCCHHHHEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCEEEEEHHH
FAQGQVARLTAQHKRVMTNTHMLAADIQDALMVNELQRVRAQAQLDWLDRQLRNGGEVKG
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYELFILGQLMDHPMTGYQLRKALVNVVGSELTISFGALYPLLDKLAAAEELTLAFKRTT
CEEEEEEHHHHCCCCCHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHCC
NKRPQKLATITAAGRTQFWQLVMTPVALNKQTQLTFQIKLNFLHLLSCDQQQVILLDFQQ
CCCCHHHHEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEECCCCCCEEEEEHHH
FAQGQVARLTAQHKRVMTNTHMLAADIQDALMVNELQRVRAQAQLDWLDRQLRNGGEVKG
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA