| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is tagG [H]
Identifier: 28377261
GI number: 28377261
Start: 313438
End: 314253
Strand: Direct
Name: tagG [H]
Synonym: lp_0343
Alternate gene names: 28377261
Gene position: 313438-314253 (Clockwise)
Preceding gene: 28377259
Following gene: 28377262
Centisome position: 9.47
GC content: 41.67
Gene sequence:
>816_bases ATGTTTACGATGTTTAAGACGATTGGCGATCAGTTCGCCAATTTCAAGATTATTCGGCGAATGGCGAAGTATGATGATCG GGCCACATACCAAAGCCATTACCTTGGGTTAGCGTGGGAATTTTTAAACCCACTGATTCAAATCGGAATTTATTACTTAG TATTCGGGGTCGCGTTAAAACGTGGCGATCCGATGCCAGGAATCCCGTATTTACCATGGATGGTTGTCGGGATTGCACCA TGGTTATACATGAACAAAACGACGCTGGACGCGTCTTCTAGCATTTATCGTCAGGTTGGGTTAGTTTCAAAGATGAAATT CCCAGTCAACGTATTACCGTCAATTAAAATTTATGGTAACTTATATAGTTTCTGGACGATGATTGCTTTTGGAATCTTCC TGATGTTCGTTAATGGCATTTGGCCCTCAGTTTCTTGGATTCAATTTATCTACTACTTTGGTTGTATGATCGTATTAATG TATTCACTTGGGATTTTTAATGCCACGGTCAGTGTTCTGATTCGTGACTGGCATATCACGCTTCAATCCGTATTGCGGAT GCTGTTCTATATGAGTGGGGTGCTATTTAACTTTACAACGTCTAACTTCCCCGCAGTTTTTGTGCGCCTACTAGAACTAA ATCCGTTCTACTACGTGCTCAACGGAATGCGGGAATCGTTGCTTAATCGTGGTTGGATCTGGCAACAGCCTAATATCACG TTGACGATTGTCTTTTGGCTCTTCAATCTCGTTGTGATTCTGACTGGAACGTATCTCTATAACAAGTTCCGTTCGAACTT TGTGGATTTGATTTAG
Upstream 100 bases:
>100_bases ATCGTTATAATGTAGTCTGCGGTTTATCTTGACCGTAAATCTGTCATGACCTTTCAAGAGGCGCTTGATCGTGTTGCGAC ATACATTTAAGGAGTGCACT
Downstream 100 bases:
>100_bases GAGGCGGAACTGATGGAAAATCAATATAAGGTTGAATTGCATAATGTCACTAAAGAATATGATTTATATCGTAGTAACAA CGATAAGTTAAAACACTTTT
Product: teichoic acid ABC transporter, permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MFTMFKTIGDQFANFKIIRRMAKYDDRATYQSHYLGLAWEFLNPLIQIGIYYLVFGVALKRGDPMPGIPYLPWMVVGIAP WLYMNKTTLDASSSIYRQVGLVSKMKFPVNVLPSIKIYGNLYSFWTMIAFGIFLMFVNGIWPSVSWIQFIYYFGCMIVLM YSLGIFNATVSVLIRDWHITLQSVLRMLFYMSGVLFNFTTSNFPAVFVRLLELNPFYYVLNGMRESLLNRGWIWQQPNIT LTIVFWLFNLVVILTGTYLYNKFRSNFVDLI
Sequences:
>Translated_271_residues MFTMFKTIGDQFANFKIIRRMAKYDDRATYQSHYLGLAWEFLNPLIQIGIYYLVFGVALKRGDPMPGIPYLPWMVVGIAP WLYMNKTTLDASSSIYRQVGLVSKMKFPVNVLPSIKIYGNLYSFWTMIAFGIFLMFVNGIWPSVSWIQFIYYFGCMIVLM YSLGIFNATVSVLIRDWHITLQSVLRMLFYMSGVLFNFTTSNFPAVFVRLLELNPFYYVLNGMRESLLNRGWIWQQPNIT LTIVFWLFNLVVILTGTYLYNKFRSNFVDLI >Mature_271_residues MFTMFKTIGDQFANFKIIRRMAKYDDRATYQSHYLGLAWEFLNPLIQIGIYYLVFGVALKRGDPMPGIPYLPWMVVGIAP WLYMNKTTLDASSSIYRQVGLVSKMKFPVNVLPSIKIYGNLYSFWTMIAFGIFLMFVNGIWPSVSWIQFIYYFGCMIVLM YSLGIFNATVSVLIRDWHITLQSVLRMLFYMSGVLFNFTTSNFPAVFVRLLELNPFYYVLNGMRESLLNRGWIWQQPNIT LTIVFWLFNLVVILTGTYLYNKFRSNFVDLI
Specific function: Part of the ABC transporter complex tagGH (TC 3.A.1.34.1) involved in exporting the two types of intracellularly synthesized teichoic acids. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1682
COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000412 - InterPro: IPR013525 [H]
Pfam domain/function: PF01061 ABC2_membrane [H]
EC number: NA
Molecular weight: Translated: 31765; Mature: 31765
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS51012 ABC_TM2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTMFKTIGDQFANFKIIRRMAKYDDRATYQSHYLGLAWEFLNPLIQIGIYYLVFGVALK CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGDPMPGIPYLPWMVVGIAPWLYMNKTTLDASSSIYRQVGLVSKMKFPVNVLPSIKIYGN CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LYSFWTMIAFGIFLMFVNGIWPSVSWIQFIYYFGCMIVLMYSLGIFNATVSVLIRDWHIT HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQSVLRMLFYMSGVLFNFTTSNFPAVFVRLLELNPFYYVLNGMRESLLNRGWIWQQPNIT HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEECCCCH LTIVFWLFNLVVILTGTYLYNKFRSNFVDLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFTMFKTIGDQFANFKIIRRMAKYDDRATYQSHYLGLAWEFLNPLIQIGIYYLVFGVALK CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGDPMPGIPYLPWMVVGIAPWLYMNKTTLDASSSIYRQVGLVSKMKFPVNVLPSIKIYGN CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH LYSFWTMIAFGIFLMFVNGIWPSVSWIQFIYYFGCMIVLMYSLGIFNATVSVLIRDWHIT HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LQSVLRMLFYMSGVLFNFTTSNFPAVFVRLLELNPFYYVLNGMRESLLNRGWIWQQPNIT HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEECCCCH LTIVFWLFNLVVILTGTYLYNKFRSNFVDLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7565096; 9384377 [H]