| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is 28377174
Identifier: 28377174
GI number: 28377174
Start: 223501
End: 223767
Strand: Direct
Name: 28377174
Synonym: lp_0248
Alternate gene names: NA
Gene position: 223501-223767 (Clockwise)
Preceding gene: 28377173
Following gene: 28377175
Centisome position: 6.76
GC content: 46.07
Gene sequence:
>267_bases ATGTTTGGAATATTGATATTAGCAGCATTCGTAATCGGCAGTGAATGGTTAGTGAGTCGGGGGGTGATGCCAGCATATTT GATCAAAGCACGAACGGGTCAGACTTTGTGGCGTGCTTTACTGAGTATCCTTGTAACGGTCGGGCTAGTCGGCTGGCTTC ATTTACCAGCTGTGATTGCCATAGTAGTGACGATTTATTTTGCAACAATTATTGCGAACCGCTACCTGCAAGTTTTTGAA GCAATGGAACGGGGGAAACGCGGATGA
Upstream 100 bases:
>100_bases GATACTCTCTTGTGTTAACTTTGTCATTGACCTTGTTATCTATTATCCGTTTTTCAAAGTGTTTGAGAAGCAACAGCTTA GCAAAGAATAGAGGGATAGC
Downstream 100 bases:
>100_bases CGAAGCGGACATTAGGAATTTCGTTGTACCCAGATCACAGTGTCTTTGAACGCGACCAGGCTTATTTAAAGGTCGCTGCC AGTTATGGGTTTACGCGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 88
Protein sequence:
>88_residues MFGILILAAFVIGSEWLVSRGVMPAYLIKARTGQTLWRALLSILVTVGLVGWLHLPAVIAIVVTIYFATIIANRYLQVFE AMERGKRG
Sequences:
>Translated_88_residues MFGILILAAFVIGSEWLVSRGVMPAYLIKARTGQTLWRALLSILVTVGLVGWLHLPAVIAIVVTIYFATIIANRYLQVFE AMERGKRG >Mature_88_residues MFGILILAAFVIGSEWLVSRGVMPAYLIKARTGQTLWRALLSILVTVGLVGWLHLPAVIAIVVTIYFATIIANRYLQVFE AMERGKRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9746; Mature: 9746
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGILILAAFVIGSEWLVSRGVMPAYLIKARTGQTLWRALLSILVTVGLVGWLHLPAVIA CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IVVTIYFATIIANRYLQVFEAMERGKRG HHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFGILILAAFVIGSEWLVSRGVMPAYLIKARTGQTLWRALLSILVTVGLVGWLHLPAVIA CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IVVTIYFATIIANRYLQVFEAMERGKRG HHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA