| Definition | Lactobacillus plantarum WCFS1, complete genome. |
|---|---|
| Accession | NC_004567 |
| Length | 3,308,274 |
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The map label for this gene is pts3C [H]
Identifier: 28377173
GI number: 28377173
Start: 222157
End: 223491
Strand: Direct
Name: pts3C [H]
Synonym: lp_0247
Alternate gene names: 28377173
Gene position: 222157-223491 (Clockwise)
Preceding gene: 28377172
Following gene: 28377174
Centisome position: 6.72
GC content: 42.62
Gene sequence:
>1335_bases TTGGCGCGGAGGACACTAAGACTTCTACGCATACCATATTTGTATGACTGGTGTAATATGGATAACTTTATCAACATGTT AAATGCTAAAGTTTTGCCAGTAGCGAATAAAGTCGGCACGCAGCGGCATATGACCGCGATTAGAAAAGGAATTATCTCAA CGCTGCCATTAACGATTGTCGGATCGTTCTTTACCATTCTCAATAATATGCCGATTGAAGCGGTGGCTAACTTTTTGGCG CCTTACGCTGAAATTTTGGACGTGCCGTTTCGTTATACGGTTGGAATCTTGGCCTTGTACGCAACGTTTGGAATCGCATC TTCACTTGCCGAAAGTTATCAGTTAGATAAATTAACTAATGGTGTTTTAGCCGTCTTAGCATTTCTCGTGTCGACCGCAG TACCAGTTCACGTGACTAAAAATGTTAGCGGTGTCATTAGCAGTGGGCGATACATTAACATTGCTAACTTGAGTGCCTCG TCGTTGTTCGGCTCGATTATTACGGGATTATTGACGGTAGAAATTTTTCGTTATTTAAAGAATCGCAATATTACCATTAA AATGCCAGAAGGGGTACCACCAGAAGTTTCTAATTCCTTCGTAGCCTTAGTCCCAGCTGCCGTTATCCTAGTGTTGTTTT GGGGCATTCGCTATCTTTTGGACTTTAATATTTCCTCATTTTTAAGCACGCTACTGATGCCCCTCAAAGGTGTTTTGGTC GGCAATAGTTTGTTTGGTGGTCTACTGACGATTTTTCTCATTACTGGATTTTGGACATTAGGAATTCATGGGGCTGCGAT TATGGACCCTGTTATCCGGCCGTTCTGGGAAATGTCGATTGCCCAAAATATGAGCGAGTTCACTAGTGGCACGAGCGCCC ATAATCTGTCGACCATTTTTACTGAACAATTTTTGCAATGGTTTATTTGGATTGGTGGAGCCGGAGGGACGTTAGCGTTG GTTGTGTTGTTTATGTTTTCTAAATCGACCTATTTGCGCGATCTAGGCAAGTTGTCCTTGTTACCCGGTCTGTTTAATAT TAACGAACCGATTATTTTTGGGGCACCCATCGTGATGAATCCGATTCTAGGGATTCCGTTTATTATTGGTCCTTTAATTA CTGGAAGCTTAGCTTACGTGTTGACAATCACCGGCGTCGTTCCGATGATGATGGCCAGGTTACCGTTTACTGTTCCGGGA CCACTCGGTGCGTTTATTAGTACAAATTGGAGTGTTCCGGCGCTGATACTCTCTTGTGTTAACTTTGTCATTGACCTTGT TATCTATTATCCGTTTTTCAAAGTGTTTGAGAAGCAACAGCTTAGCAAAGAATAG
Upstream 100 bases:
>100_bases CTCAGCGACCGTAGCAGCATTGGTTGGTCAGGATTGCTGATGTTGCGTAATTAACAATACACTCATTGGTAAACTCATGA AAGGAAATGTACAAACTTTC
Downstream 100 bases:
>100_bases AGGGATAGCATGTTTGGAATATTGATATTAGCAGCATTCGTAATCGGCAGTGAATGGTTAGTGAGTCGGGGGGTGATGCC AGCATATTTGATCAAAGCAC
Product: cellobiose PTS, EIIC
Products: protein histidine; sugar phosphate
Alternate protein names: Putative PTS system EIIC component [H]
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MARRTLRLLRIPYLYDWCNMDNFINMLNAKVLPVANKVGTQRHMTAIRKGIISTLPLTIVGSFFTILNNMPIEAVANFLA PYAEILDVPFRYTVGILALYATFGIASSLAESYQLDKLTNGVLAVLAFLVSTAVPVHVTKNVSGVISSGRYINIANLSAS SLFGSIITGLLTVEIFRYLKNRNITIKMPEGVPPEVSNSFVALVPAAVILVLFWGIRYLLDFNISSFLSTLLMPLKGVLV GNSLFGGLLTIFLITGFWTLGIHGAAIMDPVIRPFWEMSIAQNMSEFTSGTSAHNLSTIFTEQFLQWFIWIGGAGGTLAL VVLFMFSKSTYLRDLGKLSLLPGLFNINEPIIFGAPIVMNPILGIPFIIGPLITGSLAYVLTITGVVPMMMARLPFTVPG PLGAFISTNWSVPALILSCVNFVIDLVIYYPFFKVFEKQQLSKE
Sequences:
>Translated_444_residues MARRTLRLLRIPYLYDWCNMDNFINMLNAKVLPVANKVGTQRHMTAIRKGIISTLPLTIVGSFFTILNNMPIEAVANFLA PYAEILDVPFRYTVGILALYATFGIASSLAESYQLDKLTNGVLAVLAFLVSTAVPVHVTKNVSGVISSGRYINIANLSAS SLFGSIITGLLTVEIFRYLKNRNITIKMPEGVPPEVSNSFVALVPAAVILVLFWGIRYLLDFNISSFLSTLLMPLKGVLV GNSLFGGLLTIFLITGFWTLGIHGAAIMDPVIRPFWEMSIAQNMSEFTSGTSAHNLSTIFTEQFLQWFIWIGGAGGTLAL VVLFMFSKSTYLRDLGKLSLLPGLFNINEPIIFGAPIVMNPILGIPFIIGPLITGSLAYVLTITGVVPMMMARLPFTVPG PLGAFISTNWSVPALILSCVNFVIDLVIYYPFFKVFEKQQLSKE >Mature_443_residues ARRTLRLLRIPYLYDWCNMDNFINMLNAKVLPVANKVGTQRHMTAIRKGIISTLPLTIVGSFFTILNNMPIEAVANFLAP YAEILDVPFRYTVGILALYATFGIASSLAESYQLDKLTNGVLAVLAFLVSTAVPVHVTKNVSGVISSGRYINIANLSASS LFGSIITGLLTVEIFRYLKNRNITIKMPEGVPPEVSNSFVALVPAAVILVLFWGIRYLLDFNISSFLSTLLMPLKGVLVG NSLFGGLLTIFLITGFWTLGIHGAAIMDPVIRPFWEMSIAQNMSEFTSGTSAHNLSTIFTEQFLQWFIWIGGAGGTLALV VLFMFSKSTYLRDLGKLSLLPGLFNINEPIIFGAPIVMNPILGIPFIIGPLITGSLAYVLTITGVVPMMMARLPFTVPGP LGAFISTNWSVPALILSCVNFVIDLVIYYPFFKVFEKQQLSKE
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]
COG id: COG1455
COG function: function code G; Phosphotransferase system cellobiose-specific component IIC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788032, Length=455, Percent_Identity=33.6263736263736, Blast_Score=197, Evalue=9e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003352 - InterPro: IPR004796 - InterPro: IPR004501 [H]
Pfam domain/function: PF02378 PTS_EIIC [H]
EC number: 2.7.1.69
Molecular weight: Translated: 48714; Mature: 48582
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: PS51105 PTS_EIIC_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARRTLRLLRIPYLYDWCNMDNFINMLNAKVLPVANKVGTQRHMTAIRKGIISTLPLTIV CCCHHHHHHHCCHHHHHCCHHHHHHHHCCHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHH GSFFTILNNMPIEAVANFLAPYAEILDVPFRYTVGILALYATFGIASSLAESYQLDKLTN HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLAVLAFLVSTAVPVHVTKNVSGVISSGRYINIANLSASSLFGSIITGLLTVEIFRYLK HHHHHHHHHHHCCCCEEEECCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH NRNITIKMPEGVPPEVSNSFVALVPAAVILVLFWGIRYLLDFNISSFLSTLLMPLKGVLV CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GNSLFGGLLTIFLITGFWTLGIHGAAIMDPVIRPFWEMSIAQNMSEFTSGTSAHNLSTIF CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TEQFLQWFIWIGGAGGTLALVVLFMFSKSTYLRDLGKLSLLPGLFNINEPIIFGAPIVMN HHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEECCHHHHH PILGIPFIIGPLITGSLAYVLTITGVVPMMMARLPFTVPGPLGAFISTNWSVPALILSCV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHH NFVIDLVIYYPFFKVFEKQQLSKE HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARRTLRLLRIPYLYDWCNMDNFINMLNAKVLPVANKVGTQRHMTAIRKGIISTLPLTIV CCHHHHHHHCCHHHHHCCHHHHHHHHCCHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHH GSFFTILNNMPIEAVANFLAPYAEILDVPFRYTVGILALYATFGIASSLAESYQLDKLTN HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLAVLAFLVSTAVPVHVTKNVSGVISSGRYINIANLSASSLFGSIITGLLTVEIFRYLK HHHHHHHHHHHCCCCEEEECCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH NRNITIKMPEGVPPEVSNSFVALVPAAVILVLFWGIRYLLDFNISSFLSTLLMPLKGVLV CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GNSLFGGLLTIFLITGFWTLGIHGAAIMDPVIRPFWEMSIAQNMSEFTSGTSAHNLSTIF CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TEQFLQWFIWIGGAGGTLALVVLFMFSKSTYLRDLGKLSLLPGLFNINEPIIFGAPIVMN HHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEECCHHHHH PILGIPFIIGPLITGSLAYVLTITGVVPMMMARLPFTVPGPLGAFISTNWSVPALILSCV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHH NFVIDLVIYYPFFKVFEKQQLSKE HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]