Definition Lactobacillus plantarum WCFS1, complete genome.
Accession NC_004567
Length 3,308,274

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The map label for this gene is 28377175

Identifier: 28377175

GI number: 28377175

Start: 223764

End: 224858

Strand: Direct

Name: 28377175

Synonym: lp_0249

Alternate gene names: NA

Gene position: 223764-224858 (Clockwise)

Preceding gene: 28377174

Following gene: 28377176

Centisome position: 6.76

GC content: 47.31

Gene sequence:

>1095_bases
ATGACGAAGCGGACATTAGGAATTTCGTTGTACCCAGATCACAGTGTCTTTGAACGCGACCAGGCTTATTTAAAGGTCGC
TGCCAGTTATGGGTTTACGCGACTGTTCGTCAGTATGTTGGAAGTACAAGACGGTAAAGAACGAGTTACGGAGAAATATC
AGCGGATTATTCAGTCGGCGCATCAGCGGGGCTTCACCACGACCCTGGATGTGTCCCCGAATATTTTTGACCAACTAGGT
GTGTCCTATCAGGATCTAAGCTATTTTGCGTCATTAGGAGCGGATGCAATCCGATTAGACGCCGGCTTTGATGGGCATCA
AGAAGCCTGGTTATCGTATAACTCACAGGGACTTAATCTTGAACTGAACATGAGTAACGACGTTGAGTATTTGTCTAATA
TTTTGTCATACAGTGCCAATCGACCGTTTCTTTATGGCTGCCATAACTTTTATCCGCAACGTGGGACGGGGTTGCCCTTT
GATTTTTTCGTTGCGTGTTCACGCCGGTTCAAACGAGCTGGAATTGAAACGGCAGCGTTTGTCACGGCGCCAGGCGCAAC
AATCGGTCCATGGGATATCAATGATGGCTTACCAACTTTAGAGATGCACCGTGACTGGCCGCTACAAGTACAAGTACAGC
ACCTCTTTTCGACAGGATTAATTGATAGTGTGCTCATTGGTAACGCCTATGCGAAGCAGGAAGATTTGCAAAAGCTCGGC
GCGCTTAACCGCTATCAAATCACGTTTGCGGTGACCCCTAGTGCGGACATCCAGCCCGTAGAACGCCAGATCTTACTCGA
TAATTTGCACGAGCGGCGTGGCGATATCAACGATATAACGATTCGGTCAACAGAGGTTCGCAAACGCTATCATGATTTTA
ATCGTGTCAACGATGACCGGCACACTTTTCAACGCGGTGATGTTGTGATTGGCAATGAGCAGTTCGGTAAATATCAGCAT
GAATTACAAATTGTGCAACAGCCACACACAGATACTCGGAAGAATCTGGTGGCAACGATCAATCCTGACCAACTCGTATT
ATTGGATGCAATCGGGCCGTGGACGAAATTTTCCTTTGAGGTCGCTCATGACTGA

Upstream 100 bases:

>100_bases
TACCAGCTGTGATTGCCATAGTAGTGACGATTTATTTTGCAACAATTATTGCGAACCGCTACCTGCAAGTTTTTGAAGCA
ATGGAACGGGGGAAACGCGG

Downstream 100 bases:

>100_bases
GTTATATATTCATAATGGCCGAGATGTTAGCGGTGCGCCCGTGGCAGTTTTAATCACTGACGGAGTCATTGCGGAAGTGG
GGACTGAACTGACTGTCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Surface Protein

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MTKRTLGISLYPDHSVFERDQAYLKVAASYGFTRLFVSMLEVQDGKERVTEKYQRIIQSAHQRGFTTTLDVSPNIFDQLG
VSYQDLSYFASLGADAIRLDAGFDGHQEAWLSYNSQGLNLELNMSNDVEYLSNILSYSANRPFLYGCHNFYPQRGTGLPF
DFFVACSRRFKRAGIETAAFVTAPGATIGPWDINDGLPTLEMHRDWPLQVQVQHLFSTGLIDSVLIGNAYAKQEDLQKLG
ALNRYQITFAVTPSADIQPVERQILLDNLHERRGDINDITIRSTEVRKRYHDFNRVNDDRHTFQRGDVVIGNEQFGKYQH
ELQIVQQPHTDTRKNLVATINPDQLVLLDAIGPWTKFSFEVAHD

Sequences:

>Translated_364_residues
MTKRTLGISLYPDHSVFERDQAYLKVAASYGFTRLFVSMLEVQDGKERVTEKYQRIIQSAHQRGFTTTLDVSPNIFDQLG
VSYQDLSYFASLGADAIRLDAGFDGHQEAWLSYNSQGLNLELNMSNDVEYLSNILSYSANRPFLYGCHNFYPQRGTGLPF
DFFVACSRRFKRAGIETAAFVTAPGATIGPWDINDGLPTLEMHRDWPLQVQVQHLFSTGLIDSVLIGNAYAKQEDLQKLG
ALNRYQITFAVTPSADIQPVERQILLDNLHERRGDINDITIRSTEVRKRYHDFNRVNDDRHTFQRGDVVIGNEQFGKYQH
ELQIVQQPHTDTRKNLVATINPDQLVLLDAIGPWTKFSFEVAHD
>Mature_363_residues
TKRTLGISLYPDHSVFERDQAYLKVAASYGFTRLFVSMLEVQDGKERVTEKYQRIIQSAHQRGFTTTLDVSPNIFDQLGV
SYQDLSYFASLGADAIRLDAGFDGHQEAWLSYNSQGLNLELNMSNDVEYLSNILSYSANRPFLYGCHNFYPQRGTGLPFD
FFVACSRRFKRAGIETAAFVTAPGATIGPWDINDGLPTLEMHRDWPLQVQVQHLFSTGLIDSVLIGNAYAKQEDLQKLGA
LNRYQITFAVTPSADIQPVERQILLDNLHERRGDINDITIRSTEVRKRYHDFNRVNDDRHTFQRGDVVIGNEQFGKYQHE
LQIVQQPHTDTRKNLVATINPDQLVLLDAIGPWTKFSFEVAHD

Specific function: Unknown

COG id: COG3589

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41487; Mature: 41356

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRTLGISLYPDHSVFERDQAYLKVAASYGFTRLFVSMLEVQDGKERVTEKYQRIIQSA
CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
HQRGFTTTLDVSPNIFDQLGVSYQDLSYFASLGADAIRLDAGFDGHQEAWLSYNSQGLNL
HHCCCEEEEECCCCHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHEECCCCCEE
ELNMSNDVEYLSNILSYSANRPFLYGCHNFYPQRGTGLPFDFFVACSRRFKRAGIETAAF
EEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
VTAPGATIGPWDINDGLPTLEMHRDWPLQVQVQHLFSTGLIDSVLIGNAYAKQEDLQKLG
EECCCCEECCCCCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
ALNRYQITFAVTPSADIQPVERQILLDNLHERRGDINDITIRSTEVRKRYHDFNRVNDDR
CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCH
HTFQRGDVVIGNEQFGKYQHELQIVQQPHTDTRKNLVATINPDQLVLLDAIGPWTKFSFE
HHHCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEECCCCCCEEEEE
VAHD
ECCC
>Mature Secondary Structure 
TKRTLGISLYPDHSVFERDQAYLKVAASYGFTRLFVSMLEVQDGKERVTEKYQRIIQSA
CCEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
HQRGFTTTLDVSPNIFDQLGVSYQDLSYFASLGADAIRLDAGFDGHQEAWLSYNSQGLNL
HHCCCEEEEECCCCHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHEECCCCCEE
ELNMSNDVEYLSNILSYSANRPFLYGCHNFYPQRGTGLPFDFFVACSRRFKRAGIETAAF
EEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
VTAPGATIGPWDINDGLPTLEMHRDWPLQVQVQHLFSTGLIDSVLIGNAYAKQEDLQKLG
EECCCCEECCCCCCCCCCCCEECCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
ALNRYQITFAVTPSADIQPVERQILLDNLHERRGDINDITIRSTEVRKRYHDFNRVNDDR
CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCH
HTFQRGDVVIGNEQFGKYQHELQIVQQPHTDTRKNLVATINPDQLVLLDAIGPWTKFSFE
HHHCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEECCCCCCEEEEE
VAHD
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA