Definition Clostridium tetani E88 chromosome, complete genome.
Accession NC_004557
Length 2,799,251

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The map label for this gene is 28212113

Identifier: 28212113

GI number: 28212113

Start: 2692002

End: 2692418

Strand: Direct

Name: 28212113

Synonym: CTC02534

Alternate gene names: NA

Gene position: 2692002-2692418 (Clockwise)

Preceding gene: 28212100

Following gene: 28212129

Centisome position: 96.17

GC content: 21.34

Gene sequence:

>417_bases
TTGGGAGATGAAATAATGTATATTGGTAACCTTAAAAGACAACATATTGAAATATGTAAAATTATAGAAGACATAAACTC
TTTATTGTGTAATATAGAAAGTAATTCATCTAAGATAAGTTTAAATATAAATTTATTATCTGGTAAATTAAAAATTCATT
TTCAAACTGAAGATAAGTTTTTATATCCAGATTTATTTAATAGTGAAGTTTCTAAAATAAAAACTACTGCTAAATCTTTT
GTAAATGAGTGGGGTTATTTAAGTTCAGTTTTTGAAGATTATAAAAACAAATTTAATACTAAGTCTAAAATTTGTTCTAA
TATATCTTTATTTGAAAAAGAAACAAAGAAAATAATTAATGCCTTAAATGACAGAATTAATAGAGAAGAGAAGGATTTAT
ATACACTAATTGGCTAA

Upstream 100 bases:

>100_bases
TTTAATTTATTTTTACTTTCTCATCATTCGTAACATACGTTACTTATTATATTTTAATAATTATATATAATGGATACATT
GGCAAATCATATAAATTATA

Downstream 100 bases:

>100_bases
ATAAATTATTTTATTTTCATAGCTTTTCTTTGTATACACCTTACAATAGATGCCAAAAGTTTTCTAGGTGTTATTTTAGA
AATAAATACTAAAACTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MGDEIMYIGNLKRQHIEICKIIEDINSLLCNIESNSSKISLNINLLSGKLKIHFQTEDKFLYPDLFNSEVSKIKTTAKSF
VNEWGYLSSVFEDYKNKFNTKSKICSNISLFEKETKKIINALNDRINREEKDLYTLIG

Sequences:

>Translated_138_residues
MGDEIMYIGNLKRQHIEICKIIEDINSLLCNIESNSSKISLNINLLSGKLKIHFQTEDKFLYPDLFNSEVSKIKTTAKSF
VNEWGYLSSVFEDYKNKFNTKSKICSNISLFEKETKKIINALNDRINREEKDLYTLIG
>Mature_137_residues
GDEIMYIGNLKRQHIEICKIIEDINSLLCNIESNSSKISLNINLLSGKLKIHFQTEDKFLYPDLFNSEVSKIKTTAKSFV
NEWGYLSSVFEDYKNKFNTKSKICSNISLFEKETKKIINALNDRINREEKDLYTLIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16022; Mature: 15890

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDEIMYIGNLKRQHIEICKIIEDINSLLCNIESNSSKISLNINLLSGKLKIHFQTEDKF
CCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEEEECCCCE
LYPDLFNSEVSKIKTTAKSFVNEWGYLSSVFEDYKNKFNTKSKICSNISLFEKETKKIIN
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ALNDRINREEKDLYTLIG
HHHHHCCCCHHHHHHHCC
>Mature Secondary Structure 
GDEIMYIGNLKRQHIEICKIIEDINSLLCNIESNSSKISLNINLLSGKLKIHFQTEDKF
CCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEEEEEEECCCCE
LYPDLFNSEVSKIKTTAKSFVNEWGYLSSVFEDYKNKFNTKSKICSNISLFEKETKKIIN
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ALNDRINREEKDLYTLIG
HHHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA